Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00541 ATGGCAGTCATTGAAATAAACACAAAAAGCTCTCTGCATCTTCGCAGCAACAGCTTGCCCTCTGCACCTCATCCACTTGTATCACAATTTGAGGAGCATTTGAGAAGACTGAAGGGTTCTGAAGCCACCTCTTCTCTCTCATCATCTTCATTAAGCCACAAACTTAATAGCATGCAGGATTTGCATGACTGCATTGAAAAGTTGCTTCAATTGCCCATTAAACAACAAGCCTTAGCACAAGAGTGCAATGAAAAAAGGGTTGATGACCTACTAGAAGGGTCTCTTAAGCTCTTGGATATCTGTAGTATAATTAAGGATAGCCTACAGCAATCAAGGGAAAGCATGCACGAACTACAATCAGTGATCCGAAGAAGGAGAGGCAATGAAACTGGATTCGCAGTTGAGGGTGTAAAATACTTGGCTTTGAGGAAGAAGATGAAGAAGCAAATTAGAAAGGCCCTGGAAAATTTGAAAACAATGAAAGATGAGTTGATAGCTTCTTCCTCAAACAAAGACAACAACACTTCAGCCATGCTTGGATTTTTAAAAGAAGCAGAAGCAGTCACTCTGAGCTCATTAGAACATTTGTTCATGTTTATCTCTGACCCAAAAGGGCACTCAAAGCACAGCAGATGGTCAGCAATATCCAAGTTGTTGCAGCCTAAAAGAGTAGTTTGCGACTCTCAAAGTCAAGAATTAAACACCAATGAATTTGACAAGGTGGATGCAGCTTTGCAGTCTCTCATCAGTCACAAGCCTTCATCTATTGAGGATTTTCAAAGTCATATGGAAAATTTGGAGATGTGCATTCAGGATCTAGAAATAGGAGTTGAGAACCTCTCAAGAAAATTAATTAGAAATAGAGTTTCCCTTCTCAACATCTTCAACCACTGA 894 0.4004 MAVIEINTKSSLHLRSNSLPSAPHPLVSQFEEHLRRLKGSEATSSLSSSSLSHKLNSMQDLHDCIEKLLQLPIKQQALAQECNEKRVDDLLEGSLKLLDICSIIKDSLQQSRESMHELQSVIRRRRGNETGFAVEGVKYLALRKKMKKQIRKALENLKTMKDELIASSSNKDNNTSAMLGFLKEAEAVTLSSLEHLFMFISDPKGHSKHSRWSAISKLLQPKRVVCDSQSQELNTNEFDKVDAALQSLISHKPSSIEDFQSHMENLEMCIQDLEIGVENLSRKLIRNRVSLLNIFNH* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00541 297 Coils Coil 263 283 - -
Rops3g00541 297 PANTHER OS06G0725500 PROTEIN 9 294 - -
Rops3g00541 297 Pfam Protein BPS1 54 294 IPR004320 GO:0048364|GO:0048367
Rops3g00541 297 Coils Coil 143 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00541 Rops-Chr3 6796629 6797522 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00541 - - gmx:100783166 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00541 3 6796629 6797522 Rops3g00541 3 6796629 6797522 ECH