Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00539 ATGGAAACAAACACAGAGAACTCTCTGCACATAAGGTGCAACAGTTTACCCTCTGCACCTCACCCCATTGTATCACAATTCCAGGAGCATTTGCAAAGATTGAAGGATTCTGAAGCAGCCACCACTTCTTCCTCATCATCCTCAATATGCCATAAACTAAATGGCTTGCAGGATTTGCATGACTATGCTGATAAGTTGCTCCAATTGCCAACTACCCAACAAGCTTTGGCACTAGAATGCAGTGACAAGTGGGTTGATGACCTTTTAGAAGGGTCTCTGAGGCTTCTGGATGTTTGTAGTACAGCCCAAGATTGCCTTTTGAAATCCAAGGAAAACATGCAAGTGGTTCAGTCAGTTATTCGAAGGAAAGGTGCTGGCACTGAATTCACAGCTGAGGGTGGAAACTACTTGGCATCTAGGAAGAAGATGAAGAAGGCAATTCAAAAGGCCTTAAGCAATTTGAAAGGAATAAAAAATGAGTTGATGGTTTCTTCCTCAAACAAAGACAATGAGACTTCTTCTATCCTTGGCATCTTAAAAGAAGCAGAAGCATTCACTGTGAAGTCCTTAGAATCTTTGTTGTTGTTTGTCTCTGACCCCAAGGGACAATCAAAGAAGAACAGGTGGTCAACAATCTCTAAGTTGATGCAGCCAGCAAGAGTGATTTGTGACTCTCAAGAATCAGAGACAAATGAATTTGTAAAGGTGGATGCAGCTTTGCAATCTCTCATCAGTCACAAGCCTTTATCAGTGGAGAATTTTCACAGCCATATGGAAAATTTGGAGATTTGCATTGAGGATCTAGAAGTAGGTGTTGAGCTCCTTTCAAGGCAACTCATTAGAACAAGAGTTTCCCTTCTGAACATCTTCAGCCACTAG 879 0.4175 METNTENSLHIRCNSLPSAPHPIVSQFQEHLQRLKDSEAATTSSSSSSICHKLNGLQDLHDYADKLLQLPTTQQALALECSDKWVDDLLEGSLRLLDVCSTAQDCLLKSKENMQVVQSVIRRKGAGTEFTAEGGNYLASRKKMKKAIQKALSNLKGIKNELMVSSSNKDNETSSILGILKEAEAFTVKSLESLLLFVSDPKGQSKKNRWSTISKLMQPARVICDSQESETNEFVKVDAALQSLISHKPLSVENFHSHMENLEICIEDLEVGVELLSRQLIRTRVSLLNIFSH* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00539 292 Coils Coil 258 278 - -
Rops3g00539 292 Pfam Protein BPS1 52 289 IPR004320 GO:0048364|GO:0048367
Rops3g00539 292 Coils Coil 140 160 - -
Rops3g00539 292 PANTHER OS06G0725500 PROTEIN 7 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00539 Rops-Chr3 6792148 6792543 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00539 - - gmx:102663177 443.351