Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00519 ATGAACACAGAACAAACTTTCGTTCTTCTGAGTTGTTTCCATGCGGAAGAATATTATTGGAGACCTGAACTGAGGAGACTGGTCCTTCTATGTGCTATGAATCGGGAAAAGTTGATGAAGATGGCCGGTTCGGTCCGAACTGGTGGAAAGGGTACTGTCAGAAGAAAGAAGAAGGCTGTCCACAAGACAACAACCACAGATGACAAAAGACTTCAGAGCACCCTGAAGAGAATAGGGGTGAATGCCATTCCTGCAATTGAGGAGGTCAATATCTTTAAGGATGATGTAGTTATCCAGTTTCTAAACCCCAAAGTTCAAGCATCCATTGCTGCTAATACTTGGGTTGTTAGTGGCTCTCCTCAAACAAAGAAGTTGCAGGATATACTCCCTAGCATTATCCACCAATTAGGACCAGATAACTTGGAAAACCTGAAGAAACTAGCGGAGCAGTTCCAGAAGCAGGCTCCTGAAGCAGGTGTTGGTGGTGCAACAACAGCACAAGAGGAGAATGATGATGATGACGTCCCAGAGCTTGTTCCAGGAGAGACTTTTGAGACAGCTGCTGAGGAGACCAAGGCTTCTTCTTAA 588 0.4507 MNTEQTFVLLSCFHAEEYYWRPELRRLVLLCAMNREKLMKMAGSVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEAGVGGATTAQEENDDDDVPELVPGETFETAAEETKASS* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00519 195 Gene3D - 80 136 IPR038187 -
Rops3g00519 195 PANTHER TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER 32 192 IPR039370 -
Rops3g00519 195 CDD NAC_BTF3 36 151 - -
Rops3g00519 195 SMART NAC_2 68 123 IPR002715 -
Rops3g00519 195 MobiDBLite consensus disorder prediction 152 195 - -
Rops3g00519 195 FunFam Transcription factor BTF3 homolog 80 136 - -
Rops3g00519 195 Pfam NAC domain 68 123 IPR002715 -
Rops3g00519 195 ProSiteProfiles NAC A/B domain profile. 65 129 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00519 Rops-Chr3 6552706 6554938 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00519 K01527 - gmx:100499834 277.33