Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00500 ATGGCAGCAGCATCATCATCCTGTCATCTACTCGTTCTTCTTCGTTCGCACCCACCGTCATCTTCTTCTCTCATTTCCTTTCTCAAACCTCTCTTTATCTCCTCTCCCAATGCTCTTCGACAAATCCATAATGTTCCACCCCTTCGAAAAACTCTCTTCTCCTCTTCTTCTTTCTCTTCCATCGCTTTTCCTCACACACCTCCCCTTGCTGCTCTTGTTGGAGCTTCAGCACCAAAATCCATAGAAGATGATGATGATATGGAAATGGAACAATATGGTGAAGAAACAGATGAGGATGAAGACTGTGAAATGGAAACCGAAAGAGGCAATTTTGAAGATACCCAAATGGACTTGGATTCAACTTCGTCGCCGTTGGAGGGAAAGAGGGAGGAGAGATTGAAATTGGAGGTGCCCAATTTAACTGTGAAAGAAAGGAAAGAGCTTGCTTCTCATGCACACAGTTTGGGGAAAAAGCTCAAGACCCAGTTGGTGGGAAAGTCCGGTGTTACCTCCAATGTTGCTACCTCTTTCATTGAGACCCTTGAAGCAAATGAGCTTCTCAAGATTAAAATACATCGGAGTTGTCCAGGTGAGTTAGATGACGTGGTGAAGCAGTTGGAAGAAGCAACTGGTTCAGTGGCTGTTGGTCAGATTGGTCGAACGCTGATTATTTACAGGCCCAGTCTTTCCAAATTGAAGGCAGAAGAAAAGAAGAAACAAGTTCGTAAATTTGTTCTGAAAAAACAACAATACAAACCAAGACTGGTAAACAAGAGTAAGGAACAAGGACCCAAATTATCATGGCGAGGTTCATCATGGAAAGGGAGAGACCGTAGGTCATGA 843 0.4365 MAAASSSCHLLVLLRSHPPSSSSLISFLKPLFISSPNALRQIHNVPPLRKTLFSSSSFSSIAFPHTPPLAALVGASAPKSIEDDDDMEMEQYGEETDEDEDCEMETERGNFEDTQMDLDSTSSPLEGKREERLKLEVPNLTVKERKELASHAHSLGKKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTLIIYRPSLSKLKAEEKKKQVRKFVLKKQQYKPRLVNKSKEQGPKLSWRGSSWKGRDRRS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00500 280 Pfam CRS1 / YhbY (CRM) domain 140 226 IPR001890 GO:0003723
Rops3g00500 280 SMART CRS1_YhbY_2 140 226 IPR001890 GO:0003723
Rops3g00500 280 Gene3D - 139 240 IPR035920 -
Rops3g00500 280 ProSiteProfiles CRM domain profile. 138 237 IPR001890 GO:0003723
Rops3g00500 280 SUPERFAMILY YhbY-like 139 228 IPR035920 -
Rops3g00500 280 FunFam RNA-binding CRS1 / YhbY (CRM) domain protein 139 238 - -
Rops3g00500 280 MobiDBLite consensus disorder prediction 255 280 - -
Rops3g00500 280 PANTHER CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED 1 275 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00500 K07574 - gmx:100779359 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00500 3 6393195 6394991 Rops3g00500 3 6393195 6394991 ECH