Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00499 ATGTGGAGTCAGATGAAAGAAATTGCCAAGTTTACTGGGCCAGCAATTGGGCTTTGGATATGTGGACCGTTAATGAGTCTCATCGATACTGCAGTTATTGGTCAAGGAAGTTCCATTGAACTTGCTGCTTTAGGTCCTGCTACAGTTGTTTGTGATTACATGAGCTACGTGTTTATGTTTCTATCAGTTGCTACTTCCAATATGGTTGCTACTGCCCTTGCTAAACAGGATAGAGAAGAAGTGCAGCATCACATATCTGTGTTGCTTTTTGTTGGGTTAGCTTGTGGTTTCATGATGCTTTTGTTCACAAGGCTATTTGGTGCTGCAACACTCACTGCTTTCACTGGGCCAAAGAATGTACAAGTAGTACCTGCAGCTAACACTTATGTACAGATTCAAGGCTTGGCATGGCCTGCTTTACTTGTTGGATGGGTTGCTCAGAGTGCAAGTCTTGGTATGAAAGATTCCTGGGGACCCTTGAAAGCTTTGGCTGCTGCTAGTGTTATAAATGGCATTGGTGATATACTTTTATGCACCTATTTAGGCTATGGAATTGCAGGGGCTGCATGGGCTACAATGGCATCACAAGTTGTTGCTGCTTATATGATGATGCAAACTCTAAACACGAAGGGTTACAATGCATTTTCCTTCTCTGTTCCTTCAGGGAAGGAACTTTTGATGATACTTGGGCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTACTCACTGCTTATATATTTTGCTACATCAATGGGTACCCATACAATGGCTGCTCACCAAGTCATGGTCCAAACCTTTTGCATGTGTACAGTATGGGGTGAACCTCTCTCCCAAACTGCCCAATCATTTATGCCCGAATTGATATATGGAGTAAATCGGAGTTTGTCAAAGGCTCGATTGCTTCTAAGGTCTCTTGTGATAATCGGAGCTACACTTGGATTGTTGTTAGGGATTGTTGGAACATCAGTTCCTTGGTTATTTCCCTACATTTTTACACCTGATCAGATGGTCATCCAGGAGATGCATAGGGTGCTGATTCCATACTTTGTAGCACTGGCTGTAACACCCCCTACTCACAGCCTTGAGGGGACGTTGCTGGCTGGAAGGGATCTAAGATATATAAGTTTGTCAACTAGTGGATGCCTTTGCGTGGGTGCACTAGTATTATGGGATAGGAAGAACAGTTTGGAGAGTATATTCCAGAAGGAATAA 1227 0.4311 MWSQMKEIAKFTGPAIGLWICGPLMSLIDTAVIGQGSSIELAALGPATVVCDYMSYVFMFLSVATSNMVATALAKQDREEVQHHISVLLFVGLACGFMMLLFTRLFGAATLTAFTGPKNVQVVPAANTYVQIQGLAWPALLVGWVAQSASLGMKDSWGPLKALAAASVINGIGDILLCTYLGYGIAGAAWATMASQVVAAYMMMQTLNTKGYNAFSFSVPSGKELLMILGLAAPVFMTMMSKVAFYSLLIYFATSMGTHTMAAHQVMVQTFCMCTVWGEPLSQTAQSFMPELIYGVNRSLSKARLLLRSLVIIGATLGLLLGIVGTSVPWLFPYIFTPDQMVIQEMHRVLIPYFVALAVTPPTHSLEGTLLAGRDLRYISLSTSGCLCVGALVLWDRKNSLESIFQKE* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00499 408 Pfam MatE 18 172 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops3g00499 408 CDD MATE_DinF_like 4 395 IPR044644 -
Rops3g00499 408 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 3 390 IPR044644 -
Rops3g00499 408 NCBIfam MATE family efflux transporter 14 394 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00499 Rops-Chr3 6388613 6392302 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00499 K03327 - gmx:100778835 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00499 3 6388613 6392302 Rops3g00499 3 6388613 6392302 ECH