Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00497 ATGGATCGCACTCTTCACACCTCTTCTCCCTTCTTCAATAACCATCACTTACGTCCTCGTTTCCATGCACCTTCTTCCCTTCTCAATCACGCTACTATTATTCCTCCTTCTAACTTATTCCTCGCAGTGTCGTCTAGACGACGTCGTCGCATTGGACTCGTAACCGCTCGCTTAGTTGGAATAAGTCACGAACTCACTGACGAATCCGAAGACGAAGACCAAATAATCAGTGAAGTGGAGAAAGATGAAGAAATGGAGAAAAAGGAACTAGCGGAACAGAGTATGTGGAGTCAGATGAAGGGAATTGCCAAGTTTACTGGGCCTGCTATTGGGCTTTGGTTGTGTGATCCATTGATGAGTCTCATTGATACTGCAATTGTTGGTCAGGGAAGCTCAACTGAGCTTGCTGCTTTAGGTCCTGCTACGGTTGTTTGCGATTACATGACCTTAACGTTCATGTTTCTGTCTGTTGTTACTTCCAATATAATTGCTACTGCCCTTGCTAAACAGGATAGAGAGGATGTGCAGCATCACTTATCTGTCTTGCTTTTTGTTGGGTTAGCATGTGGGGTCGTGATGCTTTTGTCTACGAAGTTATTTGGTGCAGCAACACTCACCGTTTTTACCGGGCCAAAGAATGCACATGTAGTACCTGCGGCTAATACTTATGTCCAGATTCGAGCCTTGTCGTGGCCTGCTTTACTTGTTGGATGGGTTGCACAGAGTGCAAGTCTTGGTATGAAAGATTCCTGGGGACCCTTGAAGGCTTTGGCTGTTGCCAGTTTTATAAGTGGAATGGGTGATGTAATTTTGTGCAGTTGTTTAGGCTATGGTATTACAGGGGCTGCATGGGCTACAATGGCAGCACAAGTCGTTTCTGCGTATATGATGATTCAAACTCTAAACAAGAAGGGATACAATGCATTTGCCTTCTCCATTCCTTCATGGAAGGAATTTCTGACAATACTCGGTCTTGCTGCTCCTGTATATTTGACTTCAATATCAAAGGTGGCTTTCTTCTCTCTACTCATATACGTTACTACATCAATGGGTACACAAACAATGGCCGCTCATCAAGTCATGATTCAAATCTACATGGCGTGTACAGTATTTGGTGAACCTCTCTGCCAAACTGCTCAGTCATTTATGCCTGAGTTGATGTATGGAGTAAATCAGAGTTTGTCAAAGGCCCGATTGCTTCTAAGGTCTCTTGTAATTATTGGAGCTATACTTGGATTGTTGTTAGGGATTGTTGGAACATCTCTTCTTTGGTTATGCCCCTACATTTTTACACCTGATCAGTTGGTCATCCAGAAGATGCATAGGACACTGATTCCATTCTTTGTAGCGCTAGCTGTGACACCCCCTACTCGCAGCCTAGAGGGAACATTGCTGGCTGGACAGGATCTAAAATTTATAAGTTTGTCAACATGTGGATGCTTTTGTCTGGGTGCTCTAGTATTAATGATCTTTAGTAGATATGGTTTGCAAGGCTGTTGGTTAACCCTTGCTGGATTTCAGTGGGCACGGTTTTTAGTGGCCTTTCTGCGCCTTGCCTCTCCTAATAGCTTCTTATACTCGGAAGAGGCCAGTGTAAGCAAGTTGAGGACTGCATAG 1617 0.4403 MDRTLHTSSPFFNNHHLRPRFHAPSSLLNHATIIPPSNLFLAVSSRRRRRIGLVTARLVGISHELTDESEDEDQIISEVEKDEEMEKKELAEQSMWSQMKGIAKFTGPAIGLWLCDPLMSLIDTAIVGQGSSTELAALGPATVVCDYMTLTFMFLSVVTSNIIATALAKQDREDVQHHLSVLLFVGLACGVVMLLSTKLFGAATLTVFTGPKNAHVVPAANTYVQIRALSWPALLVGWVAQSASLGMKDSWGPLKALAVASFISGMGDVILCSCLGYGITGAAWATMAAQVVSAYMMIQTLNKKGYNAFAFSIPSWKEFLTILGLAAPVYLTSISKVAFFSLLIYVTTSMGTQTMAAHQVMIQIYMACTVFGEPLCQTAQSFMPELMYGVNQSLSKARLLLRSLVIIGAILGLLLGIVGTSLLWLCPYIFTPDQLVIQKMHRTLIPFFVALAVTPPTRSLEGTLLAGQDLKFISLSTCGCFCLGALVLMIFSRYGLQGCWLTLAGFQWARFLVAFLRLASPNSFLYSEEASVSKLRTA* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00497 538 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 67 527 IPR044644 -
Rops3g00497 538 CDD MATE_DinF_like 98 520 IPR044644 -
Rops3g00497 538 Pfam MatE 113 262 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00497 Rops-Chr3 6377837 6383758 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00497 K03327 - mtr:11443583 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00497 3 6377837 6383758 Rops3g00497 3 6377837 6383758 ECH