Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00479 ATGGAAATCTGTGGAACCACAGCTCTGACATGGTCTCACACCCTTTGTCCTTCACTTCACCTTCCTCGACCCCTCTTGACCAGGGAAGCTAGGAGGTTCAGGGTTTGGTGTGTCTCTGATCAAAGCCCAAAGGGAAATCAAATGATCATATCTGTAACCGGCGCAACGGGTTTTATAGGTAGAAGGTTGGTGCAAAAACTGCATGAAGAAAATCATAGTGTTCATGTCTTGACGCGCTCTAAATCTACAGCAGAACTAATTTTTCCGGTAAAAGACTTTCCTCGAATCAAGATTGCAGAGGAGAGAGAATGGAAGGATTGCATTTGGGGCTCAACGGGGGTTGTGAATTTGGCTGGATTGCCCATAAGTACCAGATGGTCCCCAGAGATAAAGAAGGAAATCAAGCAGAGCAGGATTAGAGCGACCTCAAAAGTTGTAGAATTGATAAACAGTGCACCAGAGGATATTCGACCGAAAGTTTTGGTTAGTGCAACAGCTGTTGGTTATTATGGCACCAGTGAGACACAAGTATTTGATGAGCAAAGTCCATCAGGAAAGGATTACTTGGCTGAGGTTTGCAGAGAATGGGAATCAACGGCCCTAAGGGTAAATGGAGATGTTAGAGTGACTCTAATTCGCATTGGTGTTGTTCTTGGTAAAGATGGTGGGGCACTAGCTAAAATGATACCTCTCTTCATGATGTTTGCTGGTGGACCTCTAGGCTCTGGAAAACAGTGGTTCTCCTGGATTCATTTGGATGACATTGTCAATTTAATATATGAGGCACTATCAAATCCATCTTACAAAGGAGTTATCAATGGAACTTCACCAAACCCTGTGCGATTGTCAGAATTGTGTGACCAGCTGGGACATGCCTTGGGTCGTCCCTCATGGCTGCCCGTACCTGATTTTGCGCTCAAGGCTGTCCTTGGAGAAGGTGCTTCTGTGGTTTTAGAAGGGCAGAGAGTGCTTCCTACTCAAGCTAAGAAGTTGGGTTTCCCATTTAAATATTCTTATGTGAAGGATGCCCTTAAAGCAATTCTTTCTTGA 1050 0.4457 MEICGTTALTWSHTLCPSLHLPRPLLTREARRFRVWCVSDQSPKGNQMIISVTGATGFIGRRLVQKLHEENHSVHVLTRSKSTAELIFPVKDFPRIKIAEEREWKDCIWGSTGVVNLAGLPISTRWSPEIKKEIKQSRIRATSKVVELINSAPEDIRPKVLVSATAVGYYGTSETQVFDEQSPSGKDYLAEVCREWESTALRVNGDVRVTLIRIGVVLGKDGGALAKMIPLFMMFAGGPLGSGKQWFSWIHLDDIVNLIYEALSNPSYKGVINGTSPNPVRLSELCDQLGHALGRPSWLPVPDFALKAVLGEGASVVLEGQRVLPTQAKKLGFPFKYSYVKDALKAILS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00479 349 NCBIfam TIGR01777 family oxidoreductase 50 344 IPR010099 -
Rops3g00479 349 Gene3D - 44 338 - -
Rops3g00479 349 Pfam Domain of unknown function (DUF1731) 301 347 IPR013549 -
Rops3g00479 349 CDD SDR_a8 50 348 - -
Rops3g00479 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 345 IPR036291 -
Rops3g00479 349 PANTHER SUGAR NUCLEOTIDE EPIMERASE RELATED 35 348 - -
Rops3g00479 349 Pfam NAD dependent epimerase/dehydratase family 50 267 IPR001509 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00479 K07071 - gmx:100813590 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00479 3 6077238 6083359 Rops3g00479 3 6077238 6083359 ECH