Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00477 ATGGCAATAACACTGAACAGTGGTTTCAAGATGCCCATCATCGGACTTGGGGTATGGCGCATGGAAGGACAAGAAATTAGGGACCTTATTCTCAATTCCATCAAAATCGGTTATCGCCACTTTGATTGTGCTGCTGACTACAGGAACGAAGCTGAAGTTGGAGAGGCTCTTAAAGAGGCTTTTGATGGTGGACTTGTGAAGAGGGAGGATCTTTTCATTACCACAAAGCTTTGGAATTCTGATCATGGCCATGTTCTTGAAGCCTGCAAAGACAGTCTCAAGAAGCTTAAGTTAGATTATCTGGATTTATATCTTGTTCACTTTCCTGTTGCCACAAGGCACACTGGGGTTGGTACTACAGATAGTGCTTTGGGTGAGGATGGGGTCTTGGACATTGATACTAGCATATCCTTGGAAACTACCTGGCATGCGATGGAAGATCTTGTTTCATCAGGCTTGGTTCGCAGCATAGGGATCAGCAACTATGATATCTTTCTGACCAGAGATTGTTTAGCATATTCCAAGATAAAGCCTGCTGTAAATCAGATTGAAACTCATCCATACTTCCAGCGTGACTGTCTAGTAAAATTTTGTCAGAAGCACGGTGTTTGTGTTACTGCCCACACTCCGCTAGGAGGTGCTGCTGCAAACACAGAATGGTTTGGTACAGTTTCATGTTTGGATGACCAAGTTCTCAAAGGTCTGGCTGAAAAATACAAAAAGACTCCTGCCCAGATTGCTCTTCGATGGGGCATTCAAAGGAACACTGTGGTCATTCCTAAAACATCAAAACTAGATAGATTGAAAGAGAACTTCCAAGTATTTGATTTTGAGTTATCTAAAGAGGACATGGAGCTCATCGGAAGTATAGACAAGAAATATCGAACTAATCAACCAGCCAAGTTTTGGGGCATAGATCTTTATGCGTGA 930 0.4258 MAITLNSGFKMPIIGLGVWRMEGQEIRDLILNSIKIGYRHFDCAADYRNEAEVGEALKEAFDGGLVKREDLFITTKLWNSDHGHVLEACKDSLKKLKLDYLDLYLVHFPVATRHTGVGTTDSALGEDGVLDIDTSISLETTWHAMEDLVSSGLVRSIGISNYDIFLTRDCLAYSKIKPAVNQIETHPYFQRDCLVKFCQKHGVCVTAHTPLGGAAANTEWFGTVSCLDDQVLKGLAEKYKKTPAQIALRWGIQRNTVVIPKTSKLDRLKENFQVFDFELSKEDMELIGSIDKKYRTNQPAKFWGIDLYA* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00477 309 Gene3D - 1 306 IPR036812 -
Rops3g00477 309 SUPERFAMILY NAD(P)-linked oxidoreductase 3 299 IPR036812 -
Rops3g00477 309 PRINTS Aldo-keto reductase signature 33 57 IPR020471 GO:0016491
Rops3g00477 309 PRINTS Aldo-keto reductase signature 145 162 IPR020471 GO:0016491
Rops3g00477 309 PRINTS Aldo-keto reductase signature 91 109 IPR020471 GO:0016491
Rops3g00477 309 PRINTS Aldo-keto reductase signature 179 208 IPR020471 GO:0016491
Rops3g00477 309 PRINTS Aldo-keto reductase signature 226 250 IPR020471 GO:0016491
Rops3g00477 309 Pfam Aldo/keto reductase family 14 291 IPR023210 -
Rops3g00477 309 CDD AKR_AKR2A1-2 1 308 IPR044485 GO:0047641
Rops3g00477 309 ProSitePatterns Aldo/keto reductase family putative active site signature. 259 274 IPR018170 GO:0016491
Rops3g00477 309 ProSitePatterns Aldo/keto reductase family signature 2. 145 162 IPR018170 GO:0016491
Rops3g00477 309 PIRSF AKR 1 308 IPR020471 GO:0016491
Rops3g00477 309 FunFam NADP-dependent D-sorbitol-6-phosphate dehydrogenase 1 306 - -
Rops3g00477 309 ProSitePatterns Aldo/keto reductase family signature 1. 37 54 IPR018170 GO:0016491
Rops3g00477 309 PANTHER 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE 3 303 IPR020471 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00477 Rops-Chr3 6070731 6073092 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00477 - - gmx:100806500 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00477 3 6070731 6073092 Rops3g00477 3 6070731 6073092 ECH