Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00476 ATGGAGGTTCTTCTTGTTCAATTACTTAGGGTGGCTTGGATCGCTGGTACATTGCCAATTATCATCGCTTTAATTCCCACTTCCAAGCTGAGATGGCTCCGTAGAACCTTGTTGGGGTTTGCTAGAAGGGGAAAGATCATGCACTCTTCTTCCCAAAAATTCACTGTCCCGCAAAGATTCTTCTTGCACTTCTATGCTGTGTCTTCAATATGGACAACGTTCCTACTTGTTACAACGTGGTTTTATGCTTACAGAATGGTACCGTTGGTTTCAGAGTCATTTTCTTATTCTACCATTACTAGCTCCTTGACTGGAGGTTCAACTATGAGAGCTGGTTCAGAGAAATTAAGGCAGAGATATGTTGCAGGGCAAGCTGTTTTTCTGCTTTTGCTAATGGAAGTTCAAGTCCTCAGACGCCTTTATGAATCGATATACATTTTTAACTATAGTCCTTCTGCTCGAATGCATATCATTGGTTATTTGACTGGATTGTTTTTCTACGTAGCAGCACCATTATCACTCTGTGGTGATTGTGCATCGGATGTTTTTGCCTTCCTAGCAAATCTAGTGACCGAGTTCATTGTCAAAGGCAAGAATCGGATGCAACCAACAGAGTTAGAATTCTGGCAAGTTTTGAATCCTCTATTCAAGCTTGGGTGGAAGCATTGGATTGGTGCTGCTGTTTTTACATGGGGCTGGATTCATCAATACCGATGCCATAAGATTCTTGGTTCTCTCCGAGATTCAAGACAAGCAGATGAATATGTAATTCCTCGTGGTGATTGGTTTGAAATCGTTTCCTCTCCACATTATCTCTCTGAAATTGTTATATACGCCTGTTTTGTGGTCGCTACCGGAGGATCCAATCTAACAATCTGGCTACTTTTTGTTTTTGTGGTGGCAAATCTGACATTTGCAGCTGTGGAAACACATAACTGGTATCGTCAGAAATTTGAAGATTATCCAAGTAATCGGTTTGCTATAATTCCATTTATTCTCTGA 1002 0.4092 MEVLLVQLLRVAWIAGTLPIIIALIPTSKLRWLRRTLLGFARRGKIMHSSSQKFTVPQRFFLHFYAVSSIWTTFLLVTTWFYAYRMVPLVSESFSYSTITSSLTGGSTMRAGSEKLRQRYVAGQAVFLLLLMEVQVLRRLYESIYIFNYSPSARMHIIGYLTGLFFYVAAPLSLCGDCASDVFAFLANLVTEFIVKGKNRMQPTELEFWQVLNPLFKLGWKHWIGAAVFTWGWIHQYRCHKILGSLRDSRQADEYVIPRGDWFEIVSSPHYLSEIVIYACFVVATGGSNLTIWLLFVFVVANLTFAAVETHNWYRQKFEDYPSNRFAIIPFIL* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00476 333 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 225 308 IPR001104 GO:0006629|GO:0016627
Rops3g00476 333 Pfam 3-oxo-5-alpha-steroid 4-dehydrogenase 220 333 IPR001104 GO:0006629|GO:0016627
Rops3g00476 333 Gene3D - 182 332 - -
Rops3g00476 333 PANTHER DFG10 PROTEIN 1 333 IPR039698 GO:0003865|GO:0006488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00476 Rops-Chr3 6067182 6069867 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00476 K12345 - gmx:100814660 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00476 3 6067182 6069867 Rops3g00476 3 6067182 6069867 ECH