Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00473 ATGTCACCGTCGACAGGAAACTGCAGCAAAATCCGCCGCATTGTTCGGCTGCGACAAATGCTTCTACGGTGGAGGAAGAAAGCGCGATTAGTTGCGTCCGATGTTCCTGCTGGACACGTGGCGGTGTGCGTGGGACCCGGTAAGAGGAGGTTCATCGTGCGTGCTAGTTACCTGAACCACCCGATCTTTAAGAAGCTTCTGGTTCAGGCGGAGGAAGAGTATGGGTTCTGTAACCATGGACCACTCGCTATCCCTTGTGACGAGTCTTTGTTCGAAGAGCTTCTTCGGGTCATGGCCCGATCCGAACCCAGATTATCGACGCTTGAAGATTTTCAGAGGCGTTGCCACGTGGATGTAAGAAGTAATAGTAGTAGTAGTTTTGACTTTGTAGGAGAATCATGGCCGTTGCTTCATGACGACCCTATCTGCTGA 432 0.5139 MSPSTGNCSKIRRIVRLRQMLLRWRKKARLVASDVPAGHVAVCVGPGKRRFIVRASYLNHPIFKKLLVQAEEEYGFCNHGPLAIPCDESLFEELLRVMARSEPRLSTLEDFQRRCHVDVRSNSSSSFDFVGESWPLLHDDPIC* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00473 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 94 IPR003676 GO:0009733
Rops3g00473 143 Pfam Auxin responsive protein 17 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00473 Rops-Chr3 6016879 6017310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00473 6 137 Calmodulin-binding Proteins AT4G34750 50.340 4.59e-43 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00473 K14488 - gmx:100795345 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00473 3 6016879 6017310 Rops3g00473 3 6016879 6017310 ECH