Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00471 ATGACCAACAGCTCATCTTCGAAAAAGCACGATCAAGATCAACCTGAATTAAGTGGTCCTACCCCCAAATCCCAGCGAACCAAAATGGGCAAATCTGAAGACAACGATAGGAAGAACTTGGGTAAGAAACTCAGAGACGTAGAAATAAACGTTCCAATAGTGTACGGGAACATAGCATTTTGGCTTGGCAAAAAGGCTAGCGAGTATCAATCGCATAAATGGACAGTATATGTTCGAGGAGCAACCAATGAGGACCTTGGGACAGTAATAAAGCGCGCTGTTTTTCAGTTGCATTCTAGTTTCAATAATCCCACACGGGTTGTGGAGTCACCACCTTTTGAGTTGTCAGAGGCAGGATGGGGGGAATTTGAAGTTGCCATCACACTTTATTTCCACAGTGATGTTTGCGAGAAGCCTTTGAACTTATATCATCACTTGAAATTGTATCCAGAGGATGAAAACAGTTCCATGTCCACAAAGAAGCCTGTTGTTGTGGAATCTTATGATGAGATAGTTTTCCCTGATCCTTCCGAGGCTTTTTTAGCTCGTGTGCAAAGTCATCCAGCTGTGAATTTGCCAAGATTACCTGCTGGGCTTACCTTGCCTCCTCCCATACCTGTTGAGGATGCAAGTAAAAGGAGGAAAGGTGATACTAAAGACCATTCCTTAAGCCAATGGTTCCTGAATTTCTCAGAAGCCGATGAGCTCTTACAGCTTGCAGCAGCTCGTCAGCAGGTTCAAGCTCATATTGCTAAACTCAGACGACAGATTAGTTTGATAGATGGACAGCATCAACAGTTTAAATCTTCTTCTGACCATGATAAAGTTAGTGTTGATGGTGGTGGGTGTGTGATTCCGAGTTTGGTTGGAGGAGGTAGTGCTTCTTCTGACGATGGTGAGACGAGGGGTGGGGCGGCGGCGGAGGAGTGGGAAGAGAGGGAGATTGGGTTTGGGGGGAGATGGTGTGGTTGTGGAGGTGGAATTGAAGAAGATGATGGAGGATGA 1005 0.4537 MTNSSSSKKHDQDQPELSGPTPKSQRTKMGKSEDNDRKNLGKKLRDVEINVPIVYGNIAFWLGKKASEYQSHKWTVYVRGATNEDLGTVIKRAVFQLHSSFNNPTRVVESPPFELSEAGWGEFEVAITLYFHSDVCEKPLNLYHHLKLYPEDENSSMSTKKPVVVESYDEIVFPDPSEAFLARVQSHPAVNLPRLPAGLTLPPPIPVEDASKRRKGDTKDHSLSQWFLNFSEADELLQLAAARQQVQAHIAKLRRQISLIDGQHQQFKSSSDHDKVSVDGGGCVIPSLVGGGSASSDDGETRGGAAAEEWEEREIGFGGRWCGCGGGIEEDDGG* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00471 334 Gene3D YEATS domain 44 196 IPR038704 -
Rops3g00471 334 ProSiteProfiles YEATS domain profile. 43 187 IPR005033 GO:0006355
Rops3g00471 334 Pfam YEATS family 71 150 IPR005033 GO:0006355
Rops3g00471 334 MobiDBLite consensus disorder prediction 27 41 - -
Rops3g00471 334 Coils Coil 236 256 - -
Rops3g00471 334 CDD YEATS_TFIID14_like 49 180 - -
Rops3g00471 334 PANTHER PROTEIN AF-9 HOMOLOG 39 273 IPR005033 GO:0006355
Rops3g00471 334 MobiDBLite consensus disorder prediction 1 41 - -
Rops3g00471 334 MobiDBLite consensus disorder prediction 288 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00471 Rops-Chr3 5991010 5995873 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00471 K11341 - gmx:100790602 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00471 3 5991010 5995873 Rops3g00471 3 5991010 5995873 ECH