Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00455 ATGGCCATTCAAATGCACCAGACTAAATCACCTGGCTTTCCATTTTGTACCAATGGTTTCTGTACCACTGGGCTCATGTCTCGTTTCAATTCCCAACATCATCTTCTTCAGGGACCTGTTGATACCAATCTTCCTGTTTATAATTCAAATGCCTCAAATTCTCCAAACTTTGGTGTTCAACTAGAGAAGCAATGGGGAGAGATAGATCAGTACATCAGATTTCAGAATGAGCAATTGAGGTTCATGATACAAGAGAATGGAAAGCAACAAATGGCAGAACTACTGAAAATTGTGGAATCTCATTCACTTCATATCCTGAGGGAAAAGGATGAAGAGATTGCAAAAGCTGCAAGGAAAAGGGTAGAGTTGGAGGATTTTCTGAGAAAACTAGAGGAAGAGAATAGGAAATGGAAGAGGGTTGCTCAGGAAAAGGAAGCCATGGCATTAGCTCTCTATAAAACTTGGGAGGAGGAGCAGAAAACAAGAGCTTCCCATTGTTTGAACAATGGGGTGGTGGCAAATGATGCTGAGTCTTGCTGCAATGAAAGTAAAGGAAAAGCAAAGATGGAAGAAGAAGGAATGGCTGAGAACAAGGTAGGTTGTGGTGGGGTAGGTAACTTTGAACAGATTACAAGAGAGGTGATGCTTTGTAAAAGCTGTCATTCTCGGAGTTCGTGTATTCTATTCCTCCCATGCAGGCACCTTTCTTCATGCAAAGCTTGTGATGCTTTCCTGGAAGCTTGCCCTGTCTGTGGAATGCCAAAGAAGGCTAGCATTGAGACTTTGATTTTGTAG 795 0.4214 MAIQMHQTKSPGFPFCTNGFCTTGLMSRFNSQHHLLQGPVDTNLPVYNSNASNSPNFGVQLEKQWGEIDQYIRFQNEQLRFMIQENGKQQMAELLKIVESHSLHILREKDEEIAKAARKRVELEDFLRKLEEENRKWKRVAQEKEAMALALYKTWEEEQKTRASHCLNNGVVANDAESCCNESKGKAKMEEEGMAENKVGCGGVGNFEQITREVMLCKSCHSRSSCILFLPCRHLSSCKACDAFLEACPVCGMPKKASIETLIL* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00455 264 Coils Coil 113 147 - -
Rops3g00455 264 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 55 260 IPR017066 -
Rops3g00455 264 Pfam Zinc finger, C3HC4 type (RING finger) 215 255 - -
Rops3g00455 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 206 262 IPR013083 -
Rops3g00455 264 PIRSF SBP1_RNase_bind 17 264 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00455 Rops-Chr3 5640104 5641332 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00455 K19042 - gmx:100813629 290.426