Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00439 ATGGCGATGGCTTTCAAAATGGCTACTACTGGGATGTGGGTAACGGATGAGTGCAAGAACTCTTTCATGGAGATGAAGTGGAAGAAGGTGCATAGATACATAGTGTTCAAGATCGATGAAAGGTCAAGGCTTGTCACCGTTGATAAGGTGGGTGGTCCTGGTGAGAGCTATGATGATCTTGCAGCTTCCTTGCCTAACGATGATTGTAGATATGCTGTCTTCGACTTTGATTTTGTCACAGTTGATAATTGCCGCAAGAGCAAGATATTCTTCATTGCATGGGCACCAACAGCATCAAGGATAAGAGCAAAGATGCTATACGCAACATCAAAAGATGGGCTGAGAAGAGCTTTGGATGGAATAAGCTATGAAGTTCAAGCAACCGATCCAACTGAGATGGGATTCGATATAATTAAAGATAGAGCCAAATAG 432 0.4282 MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDERSRLVTVDKVGGPGESYDDLAASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRALDGISYEVQATDPTEMGFDIIKDRAK* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00439 143 FunFam Actin-depolymerizing factor 2 5 143 - -
Rops3g00439 143 SMART adf_2 16 143 IPR002108 GO:0003779
Rops3g00439 143 SUPERFAMILY Actin depolymerizing proteins 6 141 - -
Rops3g00439 143 Coils Coil 139 143 - -
Rops3g00439 143 PANTHER COFILIN-RELATED 8 142 IPR017904 GO:0015629|GO:0030042
Rops3g00439 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 140 IPR002108 GO:0003779
Rops3g00439 143 CDD ADF_cofilin_like 10 142 IPR017904 GO:0015629|GO:0030042
Rops3g00439 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
Rops3g00439 143 Gene3D Severin 2 143 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00439 Rops-Chr3 5429941 5431056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00439 K05765 - gmx:100801857 286.189