Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00438 ATGATGGGGAGTAGCGAGGATCCAAATCACAAACCCGATGATTCTCTATACGAATCTTCTGCATCACAACCCTTTCTATCAAAGCCCCCATACCCTTCTTCTCCAACCGAAGAAGAATCAGAGTCAAGCCAACAGTACCTTCACATCTCTTACAATCATGGCCCTCGTTCCTTCAAGGACCTTCCTTTCCTCATCCTCTTCCTTTTCTTCCTTCTCTCCACCTTCGCCTTTGGCATCTTCGCCATCTTCCACAGAAACACCAACTACTCTTCTCTCTCTTCTTTCACCTACGATTCCAACACCACCTCTTGCGTCAACCCTTCAAATTCTCTATCTTCCCCCATCTGGGTCTCCCTCTATTCCTCATCTTCTTCACCCCTTGTTAAGGATTTAACATGGACCCTCGTTATCACCTTCATTATAAGCATCCCCATGTGTTGGGCTCTGCTTCTCTTACTCAAGCATTATACCAAACAGATTGTCTACGTTGCTATCCCACTCTTCATCCTCATCCCCATTTTCTTAAACATTTATTGGTTCATTGCCTGTACCGTGAACTCTTCTTGCAGCGAATCGTTACCTCTTGCGTATAGAATTCTGGTTTTGGTGTTCATCTTTTTGGTTATTGGTGTGATCGTGTGGATCTTGGTGGTGAATTGGCATCGTGTGGAGCTAACTGTGAGCATAATTGGGGTGGCCTCTGATGCACTTTCTTGGAACCTGGGTTTGTTTGGGGTATTACCTTGTCTGACTATTGGGCTTTTGGTGTATTACGTGCCAATCGTGGTTTTCATGGTGTTTGCCAGGTTTAATGGTAAGATTGTACCAAACGCTGAGAAAGATTGCGTTTGGAAGGAGGATTCATGGGTGCCTGCTTATTTTACATTGGCAATTCTCACTATGTTGTGGTCTGCGGCAGCTATGTTGGAAGCACAAGTTTATGTCATTAGTGGTACTATTGCTAGTTGGTATCTCTCCAAGGAGAATGAAACTCCTTCAAAGACTATTAGAACTTCTCTCAGAAATGCTTTCGGTCCTTCTTCTGGCACAATATGTTTGTCTGGATTGCTTATCTTTGTTGTACGAGTGGTGCGTTCTGTGGTTGATAATGCAAGACAAGATACTCCTGGGATAGTGAACCTTGTGTTACGGTGCTGTGTAAATGCCTTGCTGACAGCAGTTGATTTTCTTAATAAGTTTACCATAAACTTTGCTGCAATAACCGGTGAAGCTTACTGCTCATCTGCAAGGATGACATATGAACTTCTACGGCGTAATCTTCTCTCTGCTGTCTTTGTGGAGACTATCTCATCTCGCCTCCTGGCTGGAATTGTCTTTGTCCTCTCAGCAGTATACACAATTGTGGTCTGTGTCATCTTAAAAGCTGGGACCAATCTTGGAGCTGATTCATATTTTGTGGCTGCTATGGCATGGGTACTACTGATAATTGTGCTGGGATTCCTCGTGCATGTGCTAGACATTGTAATTGACACAATTTATGTCTGCTATGCGATAGACCGGGACAGAGGAGAGTGTGGAGTTAGAATTGTCTGTTGTGCATACTTCTGA 1569 0.4385 MMGSSEDPNHKPDDSLYESSASQPFLSKPPYPSSPTEEESESSQQYLHISYNHGPRSFKDLPFLILFLFFLLSTFAFGIFAIFHRNTNYSSLSSFTYDSNTTSCVNPSNSLSSPIWVSLYSSSSSPLVKDLTWTLVITFIISIPMCWALLLLLKHYTKQIVYVAIPLFILIPIFLNIYWFIACTVNSSCSESLPLAYRILVLVFIFLVIGVIVWILVVNWHRVELTVSIIGVASDALSWNLGLFGVLPCLTIGLLVYYVPIVVFMVFARFNGKIVPNAEKDCVWKEDSWVPAYFTLAILTMLWSAAAMLEAQVYVISGTIASWYLSKENETPSKTIRTSLRNAFGPSSGTICLSGLLIFVVRVVRSVVDNARQDTPGIVNLVLRCCVNALLTAVDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRLLAGIVFVLSAVYTIVVCVILKAGTNLGADSYFVAAMAWVLLIIVLGFLVHVLDIVIDTIYVCYAIDRDRGECGVRIVCCAYF* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00438 522 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 34 506 IPR007603 GO:0022857|GO:0055085
Rops3g00438 522 MobiDBLite consensus disorder prediction 1 39 - -
Rops3g00438 522 MobiDBLite consensus disorder prediction 15 39 - -
Rops3g00438 522 Pfam Plasma-membrane choline transporter 204 508 IPR007603 GO:0022857|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00438 - - tpra:123913083 752.281