Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00434 ATGCTCCTACTCCTCACACCTGGAGGTGTCATGGCTACTACCTTCACATTTGTAAACAGATGTGATTACACAGTGTGGCCGGGCATTCTTGCAAATGCTGGTAGCCCACCACTGGATTCCACCGGTTTCGAGCTTCCCAAAGGCACTTCCCGTTCCTTTCAAGCTCCGGCAGGCTGGTCTGGCCGTTTCTGGGGCCGAACAGGCTGCAATTTCGACGGATCTGGATCCGGGTCATGCCTCACCGGCGACTGCGGCTCCAGCCAGGTCGAATGTAACGGAGCCGGAGCTGCCCCACCAGCTACCCTCGCAGAGTTCACGTTGGGAACGTTAGGACAGGACTTCTACGACGTGAGCCTTGTTGATGGGTACAATCTTCCCATGATCGTGGAAGGAACTGGCGGGTCGGGTCAGTGTGCTTCCACCGGGTGCACTTCGGATCTGAACCAACAATGTCCCACGGAGTTGAGAGCATCTGAAGGAAGCGCGTGTAAGAGCGCGTGTGAAGCTTTTGGTAGCCCTGAGTACTGTTGCAGTGGCGCGTATGGTTCACCCGCCACTTGTAGACCCTCTGTTTACTCTGAGATGTTCAAAGCTGCTTGCCCCAGATCGTATAGCTACGCATACGATGATGCTACCAGTACTTTTACATGTACTGCTGCTGATTATACGGTTACCTTTTGCCCATCCTCTCCTAGTCAGAAATCTTCACGAGATCCAACCCCAATGACCTCAACAACACCACAAGGGTCAGGGATAGGAACAGGGACAGTGATGCCTGGGACAGGGACAGTAATGCCTGGGACAGGAACAGGCTCCGAAGGGGGTGTAGTTTACACGGGTACAGACACGGGTATTGGGTATTCAAATACGGATTCAGGGTCAAGTTCAGGATCTGGAGGAGAGACCATGCTGGCAGATGGGTCATATTTAGCTGGTTTGGCCATGGGAGATTCCCACAGAACAATTTCCTCTGCATTTGTCTACACTGGCTTTTTGCTTATTCTCTCCTTGCTTTAG 1017 0.528 MLLLLTPGGVMATTFTFVNRCDYTVWPGILANAGSPPLDSTGFELPKGTSRSFQAPAGWSGRFWGRTGCNFDGSGSGSCLTGDCGSSQVECNGAGAAPPATLAEFTLGTLGQDFYDVSLVDGYNLPMIVEGTGGSGQCASTGCTSDLNQQCPTELRASEGSACKSACEAFGSPEYCCSGAYGSPATCRPSVYSEMFKAACPRSYSYAYDDATSTFTCTAADYTVTFCPSSPSQKSSRDPTPMTSTTPQGSGIGTGTVMPGTGTVMPGTGTGSEGGVVYTGTDTGIGYSNTDSGSSSGSGGETMLADGSYLAGLAMGDSHRTISSAFVYTGFLLILSLL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00434 338 SMART tha2 15 228 IPR001938 -
Rops3g00434 338 Gene3D Thaumatin 13 228 IPR037176 -
Rops3g00434 338 ProSiteProfiles Thaumatin family profile. 12 228 IPR001938 -
Rops3g00434 338 Pfam Thaumatin family 19 228 IPR001938 -
Rops3g00434 338 SUPERFAMILY Osmotin, thaumatin-like protein 13 229 IPR037176 -
Rops3g00434 338 PRINTS Pathogenesis-related protein signature 14 26 IPR001938 -
Rops3g00434 338 PRINTS Pathogenesis-related protein signature 75 104 IPR001938 -
Rops3g00434 338 PRINTS Pathogenesis-related protein signature 62 73 IPR001938 -
Rops3g00434 338 PRINTS Pathogenesis-related protein signature 113 129 IPR001938 -
Rops3g00434 338 PRINTS Pathogenesis-related protein signature 218 227 IPR001938 -
Rops3g00434 338 FunFam THAUMATIN-LIKE PROTEIN 1 13 228 - -
Rops3g00434 338 CDD TLP-PA 14 227 - -
Rops3g00434 338 MobiDBLite consensus disorder prediction 228 257 - -
Rops3g00434 338 PANTHER OS03G0233200 PROTEIN 11 228 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00434 Rops-Chr3 5349476 5351607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00434 1 236 Receptor kinase-like Gene Family AT5G38280 48.996 1.91e-78 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00434 - - gmx:100801173 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00434 3 5349476 5351607 Rops3g00434 3 5349476 5351607 ECH