LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops3g00430	ATGGCATCAGAAAAGGTGGTGGAAACGGTAATAGTTGGGAACTATGTAGAAATGGAAACTGAAGGAAAGCCAAAGGACATAAAGACCAGGTTATCAAGCTTCTTGTGGCATGGTGGTTCTGCTTATGATGCTTGGTTTAGCTGTGCTTCCAATCAGGTGGCTCAAGTCCTGCTTACGTTGCCATACTCATTTTCCCAACTGGGAATGCTTTCTGGCATACTTTTTCAACTCTTCTATGGTTTGATGGGTAGCTGGACAGCTTACCTCATCAGCATACTCTATGTTGAATACAGAACAAGAAAAGAAAGAGAAAAAGTTAATTTCAGGAACAACCATGTCATCCAGTGGTTTGAGGTACTTGATGGGCTCCTCGGGAAGCACTGGAGAAACGTGGGTTTGGCATTTAACTGCACATTTCTTCTGTTTGGATCTGTTATCCAACTGATAGCTTGTGCAAGCAACATATATTACATAAATGATAATCTGGACAAGAGGACTTGGACTTACATCTTCGGAGCTTGCTGTGCCACCACTGTCTTTATTCCTTCCTTTCACAACTACAGAATCTGGTCCTTTTTGGGACTCGTTATGACCACTTACACTGCTTGGTACCTCGCTATTGCCTCTCTCCTTCACGGCCAGGTGGAGGGAGTTAAGCATTCGGGTCCATCCAAATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTTGGGGGACATGCTGTTACTGTGGAGATAATGCACGCGATGTGGAAGCCTCAGAAGTTTAAGGCCATATATCTACTGGCTACCCTGTATGTGCTGACACTGACACTTCCATCGGCAGCTGCAGTGTATTGGGCATTTGGAGACATGCTTCTAAATCACTCCAATGCTTTTGCTCTCCTCCCAAGATCACCCTTCCGAGACATGGCTGTCATTTTAATGCTCATTCACCAGTTTATAACATTTGGGTTTGCATGCACCCCATTATACTTCGTGTGGGAGAAAGCAATAGGGATGCATGAGTGCAAGAGCCTGTGCAAGCGTGCATTTGTGAGATTGCCCGTGGTGATCCCTATATGGTTCTTGGCTATCATTTTCCCATTCTTTGGCCCCATCAACTCCACCGTTGGTTCTCTCCTTGTCAGCTTCACCGTTTACATCATCCCTGCCCTTGCTCACATCTTCACCTTCAAATCATCCTCTGCTCGACAGAATGCGGTGGAACAACCTCCCAAGTTTCTTGGAAGATGGGTGGGGTCCTACATTATAAACACATTTGTGGTAGTGTGGGTCCTAGTAGTAGGCTTTGGATTTGGTGGGTGGGCCAGCATGCTTAACTTCATACACCAGATTGATACTTTTGGACTCTTCACTAAGTGTTACCAGTGTCCACCACCACCTATGCCGCCGCAAAAGATGAACGCCACCGCGCCTTCGCCTCTTCATCACCACCCTCATGGCCATTGA	1461	0.46	MASEKVVETVIVGNYVEMETEGKPKDIKTRLSSFLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKVNFRNNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYLAIASLLHGQVEGVKHSGPSKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTLPSAAAVYWAFGDMLLNHSNAFALLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAFVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSSSARQNAVEQPPKFLGRWVGSYIINTFVVVWVLVVGFGFGGWASMLNFIHQIDTFGLFTKCYQCPPPPMPPQKMNATAPSPLHHHPHGH*	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops3g00430	486	PANTHER	OS05G0424000 PROTEIN-RELATED	43	427	-	-
	Rops3g00430	486	Pfam	Transmembrane amino acid transporter protein	37	429	IPR013057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops3g00430	Rops-Chr3	5310516	5314691	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops3g00430	4	461	Organic Solute Cotransporters	AT2G21050	89.738	0.0	866

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops3g00430	K13946		-	gmx:100812002	922.924