Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00425 ATGTTGAAGAAGATGGGTTCCGAGGTCTCCAAACAGATCGAGAGACGAAAGACAATTCTTAAAGAAGAGAAAACTCTGTCTGATCTTAAAAGCTCTGGTGAAGACTACCCATGTTCTGATTACCATCCCACAGACAGAAAAAACTGGATGTCTGGGCTAAGCCCAGAGAAAGTTAAGATCAATAAGATTGTGTGGCCTGGAACCCATGATTCTGCAACCAACAAGATTGGCATCGCAGGCATCACTCGTCCTTTTGCTCAATGTCAATCTTTGTCAATCTACAATCAACTTGTGAGGGGCACAAGGGTGCTTGACATTAGGGTGCAGAAGGATCGCAGGGTATGCCATGGAATTCTCCTAACATATAGCATGGACGTTGTCATCAAAGATGTCAAGAAGTTCTTATCAGAAACTGTGTCTGAGATCATCATCCTTGAGGTTAGAACCGAGTTTGGCCATGAAGACCCACCAGAATTCGACAAGTACCTACAGGATCAACTTGGTGAATACCTGATTCCCCAGGATAATGGTGTTTTTGAGAAGACCATTAAAGAGGTGCTACCCAAGAGAGTTATATGCGTTTGGAAGCCAAGAAAATCACCACAGCCTCAGGCAGGGTCACCCCTTTGGAGTGCAGGGTATCTCAAGGATAATTGGATCAACACAGATCTTCCATCAACCAAATTCGAAAGCAATCTTAAGCATCTGAGCGAGCAGCAACCTGTTACGTCAAGAAAATACTTCTATAGGGTGGAGAACACTGTTACACCAGTGGCAGATAACCCAGTTCTGTGTGTGAAACCTGTCACCAACCGCATTCATGGCTATGCAAGGCTCTTCATCCATCAGTGTTTCTCCAAAGGGTGTGCTGATAGATTGCAGATTTTTTCTACGGATTTTATAGACGTTGATTTCGTTGATGCATGTGTTGGACTCACTCATGCAAGGGTCGAGTGTAAAGCCTGA 966 0.442 MLKKMGSEVSKQIERRKTILKEEKTLSDLKSSGEDYPCSDYHPTDRKNWMSGLSPEKVKINKIVWPGTHDSATNKIGIAGITRPFAQCQSLSIYNQLVRGTRVLDIRVQKDRRVCHGILLTYSMDVVIKDVKKFLSETVSEIIILEVRTEFGHEDPPEFDKYLQDQLGEYLIPQDNGVFEKTIKEVLPKRVICVWKPRKSPQPQAGSPLWSAGYLKDNWINTDLPSTKFESNLKHLSEQQPVTSRKYFYRVENTVTPVADNPVLCVKPVTNRIHGYARLFIHQCFSKGCADRLQIFSTDFIDVDFVDACVGLTHARVECKA* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00425 321 SMART plcx_3 54 196 IPR000909 -
Rops3g00425 321 PANTHER UNCHARACTERIZED 35 315 - -
Rops3g00425 321 CDD PI-PLCXDc_plant 36 316 - -
Rops3g00425 321 Gene3D Phosphatidylinositol (PI) phosphodiesterase 45 313 IPR017946 GO:0006629|GO:0008081
Rops3g00425 321 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 60 188 - -
Rops3g00425 321 Pfam Phosphatidylinositol-specific phospholipase C, X domain 85 177 IPR000909 -
Rops3g00425 321 SUPERFAMILY PLC-like phosphodiesterases 45 312 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00425 Rops-Chr3 5240942 5242239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00425 5 321 Acyl Lipid Metabolism Gene Families AT4G38690 76.101 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00425 - - gmx:100789013 560.451