Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00423 ATGGAGAAACAGGAGCATTCGCGTGATCAAGGATCTAAAATCGATTCAGGGGATGCTGTTGTTGATAAACATGATGATACTGAAAAGTGTGCATTGGATTCAGCCTCGGTGGATGAAAGTATAGGTGCCGTACCGGAGCATGATTACTTTGAGGAGGCAATGGAGACACAGGAGCATTTGCGTGATCAAGGATCTAAAATCGATTCAGGGGATGCTGTTGTTGATAAACATGATGATACTGAAAAGGGGAGTGCATGGGATTCAGCCTCGGTGGATGAAAGTACAGGTGCCGTACCGGAGCATGATTACTTTGAGGAGGCAATTGGGGTTGCCAGTGAGCCCGGGAATCAGGGGGAGACTGAGGTAAGTGCTAACCAGGAGCTGGAAAGGGATGGGCAAGGGCTTGATAGTGTTCATCTGGATGGAGTTGATTCTGGAGGTACTGGAGATGGGGTAATTTGTGACGAGTCCCAGAGTTTGAGGGATGATAATTTGAAGAGTATTGATTTGAATGATGACAAGGAAGTATCTGGGTTAGATACTGATGGAGAAATGTTAGTTAAGGAGAATGGAGCCGTGGCGGATGGAAACTCTGGTTTGGTGAGTGAGAAAGCTGAAATTGATGATTCTGAGTTCATGACACCGAGAGCAAATGGTGGTATAGTCTTGGAAAATGGAAGCACAGACAAGGTGCACTATGTGGCTACCGAGTCTAATGCTGAATCTGAATCCAATGAAGTGATCACAAACCAAGGTGATGCTGGGGATTTGAAGGATGGTGGCTCAGATCCTGAATTTGGAGATGACAAGATAGAGGTAAAGTTAAATGATGCTTCAGGTGATCCTTCTAGTGAAATTCAAGATAATACAGTTGAACAAGTACATGAAAATTCAGCTCATATTAATTTAGAACATCAAGGTGAAGTAATTAGGGATGTGAATGATGAGTCTCTTGGCACTGATATAAGCCATGAGGATAGATATGGTGAGGAAATTCAGACTACTGAATATGGAAATGAGGATGCTCAAGCTGGATCAGACTCTGAGTGTCAGGAAGCAACTGGGGAAATAAGAGGAGCTTCTCCCCCTGAACTGCATGAGACTGTGCAGGAAAAGGAAGTAATGCTAGCTGCTGGAAGCTCATCCGTTTTGGAAAATTCCTCTGCTGATGAGACACCATCTGTTCACGCTAGTGCAGCTGATAAAAAAGAAACAAGTAATCCGGATTATCAGTCTCAGATTTCTACTGAAGAACATAGAGTTCGTGACATCTATGCTGTGGGTGAGGATCCTGAAAAGATACAGGAGAAGAATATGGAAGGTAAGGAAACCACTCAAATGACTAGAGACCAAAATATTCAGCCTGCAGCAGAGCCTTCTTCTCCACCTGAAAAATCTGCTGGTGCTGGGCCCCCTCCTGTTCGTCCAGCTGGCCTTGGCCGTGCAGCGCCATTGCTGGAACCTGCATCTCGGGTAGTGCAGCAGCCTCGTGTGAATGGTACTGCCGTATCCAGTGCACAGTCCCAACAAATGGATGACTCCTCAAATGGAGAGGCTGAGGAGTATGACGAGACACGTGAGCAACTTCAGATGATAAGGGTGAAATTTTTAAGGCTAGCTCACAGGCTTGGGCAAACACCCCATAATGTTGTGGTAGCTCAAGTTTTGTATAGACTAGGACTTGCTGAGCAACTCAGAGGAAGGAATGGGGGGCGTGTTGGTGCTTTTAGCTTTGATCGTGCAAGTGCAATGGCTGAGCAGCTTGAAGCTGCAGGTCAGGAGCCACTTGATTTTTCTTGTACAATAATGGTTCTTGGAAAGACAGGAGTTGGTAAAAGTGCTACCATCAATTCCATTTTTGATGAGGTTAAGTTTAATACTAGTGCTTTTCATATGGGAACCAAAAAGGTTCAGGATGTTGTGGGAACTGTGCAGGGCATAAAGGTACGGGTCATTGATACACCAGGACTTCTACCTTCCTGGTCAGACCAGAAAAGTAATGAGAAAATCCTGCACTCTGTTAAGCACTTTATTAAGAAAACACCACCTGATATTGTGCTGTATCTTGATAGGTTAGATATGCAGAACAGGGATTTTAGCGATACGCCTCTCTTACACACAATTACAGACATTTTTGGGCCATCCATATGGTTCAATGCCATCGTGGTTCTGACACATGCAGCATCTGCTCCACCTGATGGCCCTAATGGTACTGCTTCCAGTTATGACACGTTTGTTACTCAGCGCTCTCATGTTGTACAGCAAGCCATTCGTCAAGCAGCTGGTGACATGCGTCTCATGAATCCTGTATCATTGGTGGAGAACCACTCTGCATGCAGAACAAATAGGGCTGGCCAGAGAGTGTTGCCAAATGGCCAGGTTTGGAAACCTCATTTGTTACTTCTATCTTTTGCCTCAAAAATTCTGGCCGAAGCAAATGCTCTTCTTAAGTTACAAGATAATCCACCTGGGAAGCCATTTACAGCTCGAGCAAGAGTGCCTCCATTGCCTTTTCTTTTGTCAACCCTTCTCCAGTCAAGGCCGCAATTAAAGTTGCCAGAGGAGCAGTTTGGTGATGAGGACAGTCTTGATGATGACCTTGATGAATCATCAGATTCTGATGATGAAACAGAACTTGATGACTTGCCACCATTTAAACCTTTAACAAAGGCCCAGGTGGCAAAGCTGTCTAAAGATCAGAAGAAAGCGTATTTTGATGAGTTAGAATACAGAGAAAAGCTTTTGATGAAGAAACAATTGAAGGAAGAAAAAAAGCGACGGAAGATGATGAAGAAAATGGCAGAATCAGCTAAAGATCTGCCAAATGACTCTAATGAAAATGTGGAAGAAGAAAGTGGCGGTGCAGCTTCTGTTCCTGTTCCCATGCCAGATTTGGCCTTGCCTGCGTCTTTTGATTCTGATAATCCCACTCACCGGTATCGATATCTTGATTCATCGAACCAGTGGCTTGTAAGACCTGTTCTAGAAACTCATGGTTGGGATCATGATGTGGGTTATGAAGGTTTAAATGTTGAAAGATTGTTTGTTCTCAGGGACAAGATACCTGTATCTTTCACCAGTCAGGTTACTAAGGATAAAAAGGATGCTAATGTTCAGATGGAAGTAGTCAGTTCAGTTAAGCATGGGGAAGGGAAAGCGACTTCATTAGGTTTCGAGATGCAAACTGTTGGGAAGGACTTAGCTTATACATTACGCAGTGAGACTAGATTTAGTAATTTTAGAAGAAATAAGGCAACTGCTGGTCTCTCATTTACCCTCCTCGGTGATGCCTTGTCAGCTGGAATGAAGATTGAAGACAAATTGGTCGCTAATAAGCGATTCAAGCTGGTTGTTAGTGGTGGTGCAATGGCAGGGCGTGGAGATATTGCTTATGGTGGCAGTTTGGAGGCCCAATTGAGAGACAAAGATTACCCTCTAGGACGTTCCTTATCAACACTTGGACTTTCTGTTATGGATTGGCACGGAGATCTTGCTGTTGGGTGCAATGTGCAATCACAAATCCCAGTTGGACGATCTACAAACCTTATTGCCCGTGCCAATTTGAACAACCGAGGGTCAGGACAAATCAACGTTCGATTAAATAGCGCGGAACAGCTTCAACTTGCTTTGATGGGTCTCATCCCTCTACTAAAGAAGCTAGTTGGTTATCATCAACAATTGCAGTTTGGAGAATGA 3696 0.4421 MEKQEHSRDQGSKIDSGDAVVDKHDDTEKCALDSASVDESIGAVPEHDYFEEAMETQEHLRDQGSKIDSGDAVVDKHDDTEKGSAWDSASVDESTGAVPEHDYFEEAIGVASEPGNQGETEVSANQELERDGQGLDSVHLDGVDSGGTGDGVICDESQSLRDDNLKSIDLNDDKEVSGLDTDGEMLVKENGAVADGNSGLVSEKAEIDDSEFMTPRANGGIVLENGSTDKVHYVATESNAESESNEVITNQGDAGDLKDGGSDPEFGDDKIEVKLNDASGDPSSEIQDNTVEQVHENSAHINLEHQGEVIRDVNDESLGTDISHEDRYGEEIQTTEYGNEDAQAGSDSECQEATGEIRGASPPELHETVQEKEVMLAAGSSSVLENSSADETPSVHASAADKKETSNPDYQSQISTEEHRVRDIYAVGEDPEKIQEKNMEGKETTQMTRDQNIQPAAEPSSPPEKSAGAGPPPVRPAGLGRAAPLLEPASRVVQQPRVNGTAVSSAQSQQMDDSSNGEAEEYDETREQLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFNTSAFHMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWSDQKSNEKILHSVKHFIKKTPPDIVLYLDRLDMQNRDFSDTPLLHTITDIFGPSIWFNAIVVLTHAASAPPDGPNGTASSYDTFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDNPPGKPFTARARVPPLPFLLSTLLQSRPQLKLPEEQFGDEDSLDDDLDESSDSDDETELDDLPPFKPLTKAQVAKLSKDQKKAYFDELEYREKLLMKKQLKEEKKRRKMMKKMAESAKDLPNDSNENVEEESGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVLRDKIPVSFTSQVTKDKKDANVQMEVVSSVKHGEGKATSLGFEMQTVGKDLAYTLRSETRFSNFRRNKATAGLSFTLLGDALSAGMKIEDKLVANKRFKLVVSGGAMAGRGDIAYGGSLEAQLRDKDYPLGRSLSTLGLSVMDWHGDLAVGCNVQSQIPVGRSTNLIARANLNNRGSGQINVRLNSAEQLQLALMGLIPLLKKLVGYHQQLQFGE* 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00423 1231 MobiDBLite consensus disorder prediction 54 157 - -
Rops3g00423 1231 Pfam AIG1 family 600 758 IPR006703 GO:0005525
Rops3g00423 1231 MobiDBLite consensus disorder prediction 336 350 - -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 305 524 - -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 1 33 - -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 922 959 - -
Rops3g00423 1231 NCBIfam chloroplast protein import component Toc86/159, G and M domains 475 1223 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Rops3g00423 1231 Gene3D - 569 818 IPR027417 -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 928 945 - -
Rops3g00423 1231 ProSiteProfiles AIG1-type G domain profile. 597 826 IPR006703 GO:0005525
Rops3g00423 1231 MobiDBLite consensus disorder prediction 54 86 - -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 1 42 - -
Rops3g00423 1231 Pfam Translocase of chloroplast 159/132, membrane anchor domain 958 1221 IPR024283 -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 380 414 - -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 858 879 - -
Rops3g00423 1231 FunFam Translocase of chloroplast 120, chloroplastic 572 819 - -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 851 886 - -
Rops3g00423 1231 CDD Toc34_like 572 817 - -
Rops3g00423 1231 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 599 1147 IPR045058 -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 237 251 - -
Rops3g00423 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 734 IPR027417 -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 305 334 - -
Rops3g00423 1231 Coils Coil 920 940 - -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 494 515 - -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 445 459 - -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 237 269 - -
Rops3g00423 1231 MobiDBLite consensus disorder prediction 415 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00423 Rops-Chr3 5224551 5229165 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00423 - - gmx:100810931 1677.14