Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00416 ATGGGTCCCATCCCAGTCACCCATCAAGAACAAAAGCGCGTTTTGCAGAGACAACGAACCAACACTTACACTACACCTGTGAGTTTCGTTTCTTTCTTTGTGGCTCTCTTTTTTTTTTTTTTTGTTGAGGAAATTCGATCTTTCTTTTGGCGGGAAAAAGAAGAAGTGAGACGACGTCGTCACCCAATTGGAGTTGTTGTTAGAAGAAAAGAAAGAGATAGAGAAATGGGGGGGACTTCGGATAATTTCAAGGGATTGGTACTTGCAGTGTGTTCTAGTGCATTCATTGGTGCTAGCTTCATCTTGAAGAAGAAAGGTCTTAAGCGTGCTGCTTCTCGTGGCACACGTGCAGGAGTTGGCGGTTATACTTATTTACTAGAGCCACTTTGGTGGGCTGGAATGGTAACAATGATTATTGGGGAGGTTGCAAATTTTGTGGCTTATATCTATGCTCCTGCAGTTCTGGTTACTCCCCTTGGTGCACTTAGTATTATTGTCAGCTCTGTCTTGGCTCACTTCTTGTTGAAGGAACGGCTGCAGAAGATGGGAGTGTTGGGATGTGTATCCTGCATCGTGGGATCAATTGTAATTGTGATCCATGCACCACAAGAGCATACCCCAAATTCTGTCCAAGAAATATGGGATCTGGCCACTCAACCAGCAGCATTTCTAATTTATGCGGTGGCAACAGTTTCGGCAGTTTTGGCCTTGATTTTACACTTTGAACCTCGCTATGGACAGACTAATATGCTGGTCTACTTGGGAATTTGTTCATTAATGGGTTCACTCACGGTTGTGAGCATAAAGGCCATTGGAATTGCAATAAAGCTCACACTTGATGGAATAAGTCAAGTAGCTTATCCTCAGACTTGGTTTTTTGTTACAGTGGCCACAATATGTGTCATTACACAGTTGAATTACCTTAACAAGGCTCTGGATACATTCAATGCAACAATTGTTTCTCCTGTATATTATGTAATGTTCACAACTCTCACTATTATTGCCAGTGCAATAATGTTTAAGGATTGGTCTGGTCAGAATGTCAGCAGCATAGCATCTGAGATATGCGGATTCATCACCGTTCTTTCAGGAACAATCATGTTGCATGCGACTAGAGAACAGGAAGAATCTAATACGCAAGGGACCTTGCATTGGTTTGATTCGAAGAAGTGCGTTGAGGATGAACACCTGATCCTTATACATGGTTCAGATTATCTTGAACGTTGA 1227 0.423 MGPIPVTHQEQKRVLQRQRTNTYTTPVSFVSFFVALFFFFFVEEIRSFFWREKEEVRRRRHPIGVVVRRKERDREMGGTSDNFKGLVLAVCSSAFIGASFILKKKGLKRAASRGTRAGVGGYTYLLEPLWWAGMVTMIIGEVANFVAYIYAPAVLVTPLGALSIIVSSVLAHFLLKERLQKMGVLGCVSCIVGSIVIVIHAPQEHTPNSVQEIWDLATQPAAFLIYAVATVSAVLALILHFEPRYGQTNMLVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQVAYPQTWFFVTVATICVITQLNYLNKALDTFNATIVSPVYYVMFTTLTIIASAIMFKDWSGQNVSSIASEICGFITVLSGTIMLHATREQEESNTQGTLHWFDSKKCVEDEHLILIHGSDYLER* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00416 408 Pfam Magnesium transporter NIPA 81 373 IPR008521 GO:0015095|GO:0015693|GO:0016020
Rops3g00416 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 127 200 - -
Rops3g00416 408 PANTHER UNCHARACTERIZED 82 378 IPR008521 GO:0015095|GO:0015693|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00416 Rops-Chr3 5185703 5189515 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00416 K22733 - gmx:100817349 565.074