Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00395 ATGGATATGTTCCAACCAGCTTCCAAGCGCTTGAAACCCACTCTCACCCCTATTATCTGTAAATCCGGTGATAATGCCAATGGCTCCACACTTTCTGTAGACCAAAAATCGCGCATCGAATACAACAAGCTCCTCGCTAAGTCCAAAAGGAACCTCAAAATCTGCATCGAAAGGGTCTCCAAATCCAAAGCCGCAGGTTGCTTGAAACTAGAGGAGTTGCTGGTTGAAGAATCATGGTTGGAAGCTCTTTCTGGAGAATTCCAGAAACCCTACGCTGTTAATCTCTCCAAGTTTGTGGAAACAGAGATTTGCGGTGGCGACGGTGCTGTATATCCTCCTCAGCATTTGATTTTCAACGCTCTTAACTCTACTCCTTTTCATACTGTTAAGGCTGTGATCCTTGGCCAGGACCCTTATCATGGACCTGGTCAAGCAATGGGCCTTTCATTTTCGGTCCCTGAAGGAGTCAAAGTTCCTTCCAGTTTGGTAAATATATTTAAGGAACTTAAGCAAGACCTTGGCTGTTCAATTCCACCACATGGAAATCTAGAAAAATGGGCAATACAGGGTGTTCTCTTACTCAATGCTGTTCTCACAGTCAGGAAGCATCAAGCAAATTCTCATGCAAAAAAAGGCTGGGAACAATTTACTGATGCTGTTATCAAGACAATCTCAGAGAAGAAGGAAGGGGTTGTGTTTCTGTTGTGGGGAAACTCTGCTCGGGAGAAATCTAGGTTAATTGATGCAACAAAGCATCACATTCTAAAAGCTGCACATCCTTCTGGTTTATCTGCAAATAGAGGTTTCTTTGGCTGCAGGCACTTCTCTCGCACTAACCAACTTCTGGAGCAAATGGGGATTGGTCCCATAGATTGGCAGCTATAA 885 0.4407 MDMFQPASKRLKPTLTPIICKSGDNANGSTLSVDQKSRIEYNKLLAKSKRNLKICIERVSKSKAAGCLKLEELLVEESWLEALSGEFQKPYAVNLSKFVETEICGGDGAVYPPQHLIFNALNSTPFHTVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSSLVNIFKELKQDLGCSIPPHGNLEKWAIQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISEKKEGVVFLLWGNSAREKSRLIDATKHHILKAAHPSGLSANRGFFGCRHFSRTNQLLEQMGIGPIDWQL* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00395 294 NCBIfam uracil-DNA glycosylase 77 286 IPR002043 GO:0004844|GO:0006281|GO:0006284
Rops3g00395 294 SUPERFAMILY Uracil-DNA glycosylase-like 73 294 IPR036895 -
Rops3g00395 294 Gene3D - 55 294 IPR036895 -
Rops3g00395 294 CDD UDG-F1-like 91 292 IPR002043 GO:0004844|GO:0006281|GO:0006284
Rops3g00395 294 Hamap Uracil-DNA glycosylase [ung]. 76 293 IPR002043 GO:0004844|GO:0006281|GO:0006284
Rops3g00395 294 Pfam Uracil DNA glycosylase superfamily 127 281 IPR005122 -
Rops3g00395 294 FunFam Uracil-DNA glycosylase 69 294 - -
Rops3g00395 294 ProSitePatterns Uracil-DNA glycosylase signature. 130 139 IPR018085 GO:0006281|GO:0016799
Rops3g00395 294 SMART UDG_2 122 282 IPR005122 -
Rops3g00395 294 SMART UDG_2_a 122 282 - -
Rops3g00395 294 PANTHER URACIL-DNA GLYCOSYLASE 24 294 IPR002043 GO:0004844|GO:0006281|GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00395 Rops-Chr3 4884726 4896048 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00395 K03648 - gmx:100818241 503.827