Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00376 ATGCTTGTAGCTCGAAATCTCTCTCCTTCAAAGCTTAAGACTCTCTTTTATTTATCTCTCCTTTCTGATTGTAAAAACCTTTCCCACTCAAATCCCTTTTCAATATACTCAGAGACCCATCTTCAAACCTTTCCAAAATTTTCACCCCAACCATCATTTCATTTGTTTAGGTCTTTCTCTTCACAAAAGTTGCACCTTTCTCGTGAGGGTAATTATGATGAAGGCACTCCCCAATCTCTTCATGTGTGCCCTGGTTGTGGGGTTCACATGCAGGATTCAAACCCAAAACACCCTGGTTATTTTATCAAACCCTCTGAGAAGGACCTTAACTATAGATTGTATTCCCATCTTGAACCAGTTGCACAAGAACCTGAATTTTCTAATTCTGTTAAAAGGGGACTTGTCATTGAGCCTGAAAAGCTTAGTGGTGATGATGTGAACTTGATTAAGAAACCTGAGAAGCCAATGGTGTGTGCAAGATGTCATTCTTTGAGGCACTATGGGAAGGTGAAGGATCCAACAGTGGAAAACTTGTTACCAGATTTTGATTTTGATCATACTATAGGTAGGAAGTTGGCATCAACAAGTGGGGCACGTTCAGTGGTGCTTATGGTAGTGGATGTAGTGGATTTTGATGGGTCATTTCCAAGGAAGGTTGCAAAGTTGGTTTCACAAACAATTGAGGATTATTCTTCTGCATGGAAGAAGGGTAAATCAGGGAATGTGCCTAGAGTGGTACTTGTGGTGACAAAGATTGATTTATTGCCTAGCTCATTGTCACCAACAACATTGGAGCATTGGATTAGACAGAGAGCAAGAGAGGGTGGAATTAATAAGATTACTAGTTTGCACATGGTGAGTGCAATGAGAGATTGGGGGCTTAAGAATCTTGTGGATGATGTTATTGAATTGGCTGGACCTAGAGGGAATGTATGGGCTGTTGGGGCGCAAAATGCAGGAAAAAGTACATTGATAAATTCTATAGGGAAGTATGTTGGAGGGAAGATTACACATTTGACAGAAGCACCTGTGCCAGGGACCACACTTGGCATTGTTAGAGTGGAAGGTGTTCTTCCAAGTCAGGCAAAATTATTTGATACACCTGGCCTTCTTCATCCTTATCAGATTACAACTAGGTTGATGAGGGAAGAGCAAAGGCTTGTTCACATGGGCAAGGAGTTGAAACCTAGGACATATAGGATTAAGGTTGGTCATTCAATTCACATAGCTGGTCTAATGAGATTGGATATAGAAGAAATGTCCCTGGATACTATTTATGTCACAGTGTGGGCATCTCCTTATCTTCCACTGCATATGGGTAAAGTAGAAAATGCAAGTAAAATGTTCCAAGACCATTTTGGGCATCAGTTACAGCCACCAATTGGGGAGAAACGAGTTCATGAACTTGGGAATTGGGTGAGAAGAGAATTTCATGTTAGTGGGAACAGCTGGGAGTCGAGTTCTATAGACATAGCTGCTTCTGGCCTTGGTTGGTTTGCCATTGGACTTAAAGGGGATGCAGTGTTAGGTGTTTGGACTTATGAAGGAGTTGATGTTGTTCTTCGCAATTCTTTAATACCCTACAGATCACACACTTTTGAAGTTGCAGGATTTACAGTATCCAAGATTGTTTCCCAGTCTGACCAAGCTTTAAATAAGTCACATCAACGAAGTGAAAAAAAGACAAAGGGGATTGACTCAAAAGCACTATCCAGTTTTGTTGAATCATCACCATTGACTTGA 1743 0.4096 MLVARNLSPSKLKTLFYLSLLSDCKNLSHSNPFSIYSETHLQTFPKFSPQPSFHLFRSFSSQKLHLSREGNYDEGTPQSLHVCPGCGVHMQDSNPKHPGYFIKPSEKDLNYRLYSHLEPVAQEPEFSNSVKRGLVIEPEKLSGDDVNLIKKPEKPMVCARCHSLRHYGKVKDPTVENLLPDFDFDHTIGRKLASTSGARSVVLMVVDVVDFDGSFPRKVAKLVSQTIEDYSSAWKKGKSGNVPRVVLVVTKIDLLPSSLSPTTLEHWIRQRAREGGINKITSLHMVSAMRDWGLKNLVDDVIELAGPRGNVWAVGAQNAGKSTLINSIGKYVGGKITHLTEAPVPGTTLGIVRVEGVLPSQAKLFDTPGLLHPYQITTRLMREEQRLVHMGKELKPRTYRIKVGHSIHIAGLMRLDIEEMSLDTIYVTVWASPYLPLHMGKVENASKMFQDHFGHQLQPPIGEKRVHELGNWVRREFHVSGNSWESSSIDIAASGLGWFAIGLKGDAVLGVWTYEGVDVVLRNSLIPYRSHTFEVAGFTVSKIVSQSDQALNKSHQRSEKKTKGIDSKALSSFVESSPLT* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00376 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 376 IPR027417 -
Rops3g00376 580 MobiDBLite consensus disorder prediction 551 580 - -
Rops3g00376 580 CDD YqeH 158 370 - -
Rops3g00376 580 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 61 563 - -
Rops3g00376 580 Pfam 50S ribosome-binding GTPase 311 380 IPR006073 GO:0005525
Rops3g00376 580 Gene3D - 189 374 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00376 Rops-Chr3 4710103 4713288 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00376 - - gmx:100787200 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00376 3 4710103 4713288 Rops3g00376 3 4710103 4713288 ECH