Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00372 ATGATGCAACACTTCGACCTCCACCTCCACCTTCTGATGACGAGGAAGATCCATAAACTCCTCCACGTTCTCATTTTTCTCCTCACATTGGCGTTTTCACTACCTATTAGATTTAGGGTCTCTTCTGCCATACTATACACATCGAAGATGGCGGCAACATCATTTTCTGGCTTGCAAATTGCAATGTCAAGATCATGCATACCTTCATCACAAAGGATTGCAGATGCAGGTGCTACGGTTCTTGGTGGCAAGTCCAAGGTGGGATCATGGAATAAACTTGCAAGTGCATGCCATGTTGCATCAGTGCAACCTTTCCAGCGGGGCTTTACATCATCATCCACAAAATCTGTCAAAACTGTTACAAAGGCAATGTCTGAGTCTAGTGAAAAAATTCCAGTTTCAGGATTGCCGATTAATTTGAAAGGTAAAAGGGCTTTTATTGCTGGTGTGGCTGATGACAATGGATATGGATGGGCAATTGCAAAATCTCTTGCTGCAGCAGGAGCTGAAATTCTTGTTGGCACATGGGTACCTGCTCTGAATATTTTTGAGTCCAGCTTACGACGTGGAAAATTTGATGAATCACGCATATTACCAGATGGTTCGCTGATGGAGATTACTAAAGTTTACCCCTTGGATGCTGTTTTTGACAATCTTGAGGATGTACCAGAAGATATAAAAACAAACAAGCGCTACGCTGGATCCTCTAAATGGACAGTTCAGGAAGTTGCTGAATCAGTTAAGGAAGACTTTGGCAGCATAGACATCCTTGTGCACTCACTTGCCAATGGACCAGAGGTGACCAAACCATTGTTGGAGACATCTCGGAAAGGATATCTTGCTGCATTATCTGCATCTAGTTACTCCTATGTTTCTTTACTCAAGCATTTTCTTCCAATATTGAACCCAGGTGGATCTTCAATCTCTCTCACATACATTGCTTCAGAGAGGATCATTCCTGGATATGGTGGTGGTATGAGTTCTGCGAAAGCTGCACTGGAAAGTGATACCCGAGTGCTTGCTTTTGAAGCGGGTAGAAAACGCAAAATTAGAGTCAATACTATATCTGCTGGTCCACTGAGAAGTCGTGCTGCAAAAGCAATTGGATTCATTGATATGATGATTGATTATTCACTAGCCAACGCACCTCTACAGAAAGAACTATCAGCAGAGGAGGTGGGAAATGCAGCTGCCTTCTTAGCATCACCTTTGGCATCTGCTATCACTGGTACTGTTCTATATGTTGACAATGGTCTGAATGCTATGGGTGTTGGAGTTGACAGTCCTATATTTAAAGATCTTGACATTCCCAAGGACCAGCATTAA 1326 0.4284 MMQHFDLHLHLLMTRKIHKLLHVLIFLLTLAFSLPIRFRVSSAILYTSKMAATSFSGLQIAMSRSCIPSSQRIADAGATVLGGKSKVGSWNKLASACHVASVQPFQRGFTSSSTKSVKTVTKAMSESSEKIPVSGLPINLKGKRAFIAGVADDNGYGWAIAKSLAAAGAEILVGTWVPALNIFESSLRRGKFDESRILPDGSLMEITKVYPLDAVFDNLEDVPEDIKTNKRYAGSSKWTVQEVAESVKEDFGSIDILVHSLANGPEVTKPLLETSRKGYLAALSASSYSYVSLLKHFLPILNPGGSSISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKRKIRVNTISAGPLRSRAAKAIGFIDMMIDYSLANAPLQKELSAEEVGNAAAFLASPLASAITGTVLYVDNGLNAMGVGVDSPIFKDLDIPKDQH* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00372 441 Gene3D Enoyl acyl carrier protein reductase 370 427 - -
Rops3g00372 441 FunFam Enoyl-[acyl-carrier-protein] reductase [NADH] 371 426 - -
Rops3g00372 441 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 141 423 IPR036291 -
Rops3g00372 441 PRINTS Glucose/ribitol dehydrogenase family signature 348 365 IPR002347 -
Rops3g00372 441 PRINTS Glucose/ribitol dehydrogenase family signature 326 345 IPR002347 -
Rops3g00372 441 PRINTS Glucose/ribitol dehydrogenase family signature 252 263 IPR002347 -
Rops3g00372 441 PRINTS Glucose/ribitol dehydrogenase family signature 383 403 IPR002347 -
Rops3g00372 441 Gene3D - 143 369 - -
Rops3g00372 441 CDD ENR_SDR 142 423 IPR014358 GO:0004318|GO:0006633
Rops3g00372 441 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 50 433 IPR014358 GO:0004318|GO:0006633
Rops3g00372 441 FunFam Enoyl-[acyl-carrier-protein] reductase [NADH] 143 369 - -
Rops3g00372 441 Pfam Enoyl-(Acyl carrier protein) reductase 239 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00372 Rops-Chr3 4614253 4624013 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00372 50 435 Acyl Lipid Metabolism Gene Families AT2G05990 74.677 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00372 K00208 - gmx:100785606 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00372 3 4614253 4624013 Rops3g00372 3 4614253 4624013 ECH