Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00362 ATGGCGACTCTGCAATTCACATTCACTGCTGACTCAGCCATGTTATGGAGATCCTCTAGATTTCCCCATTCTTCTCGAAATCGAAGCTTCACCGTCAAAGCTTCTCTCGAAGATTCCAGAACCAGAAGACGCGTCATCGGCGAGGCCGCAACCGCAACAGCATTATCGTTGATACTCCCTTCACAGTTGCCGGCGGCGAAGGCCGAAGAGGCGTTGTCGGAGTGGGAAAGAGTTTACCTTCCAATCGACCAAGGCGTCGTGCTTCTCGACATCGCTTTCGTCCCCGATGACCCGAACCACGGTTTTCTTCTTGGGACGAGGCAAACCCTTTTGGAGACTAAAGACGGAGGAAACACTTGGGCTCCACGTTCTATACCTTCTGCGGAAGATGAAGATTTTAACTACAGGTTTAATTCTATTAGTTTCAAAGGGAAAGAAGGATGGATAGTCGGAAAACCTGCTATTTTATTGTATACTTCTGATGCTGGTGAAAGTTGGGAGAGGATACCACTTAGTGCTGAACTTCCGGGGGATATAGTATATATAAAGGCAACTGGTGAGAAGAGTGCGGAGATGGTGACTGACGAAGGTGCTATATATGTTACCTCAAACAGAGGTTACAATTGGAGGGCTGCTGTTCAGGAAACAGTGTCTGCTACTCTCAATAGAACAGTTTCTAGTGGTATTAGTGGTGCAAGTTATTACACTGGAACTTTCAATACTGTCAATCGCTCTCCGGATGGAAGGTATGTTGCTGTCTCAAGTCGTGGCAACTTCTATTTAACCTGGGAGCCTGGTCAGCCATTCTGGCAGCCACATAACAGAGCAGTAGCCAGAAGAATCCAGAACATGGGATGGAGAGCTGATGGTGGTTTGTGGCTTCTTGTTCGTGGAGGTGGTCTTTATCTCAGCAAGGGCACAGGGATAACTGAAGATTTTGAGGAGATTCCAGTTCAAAGCCGGGGTTTCGGTATTCTTGATGTGGGGTATCGTTCAGAGGAGGAGGCTTGGGCAGCAGGAGGAAGTGGTATTCTCTTGAGAACTACTAATGGTGGCAAGTCATGGATTCGTGACAAAGCTGCTGACAACATCGCTGCAAATTTATACTCAGTGAAGTTCATTGATGACAAGAAGGGATTTGTATTGGGAAATGATGGAGTCTTGCTTCGCTACCTTGGATAG 1182 0.4704 MATLQFTFTADSAMLWRSSRFPHSSRNRSFTVKASLEDSRTRRRVIGEAATATALSLILPSQLPAAKAEEALSEWERVYLPIDQGVVLLDIAFVPDDPNHGFLLGTRQTLLETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAELPGDIVYIKATGEKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGITEDFEEIPVQSRGFGILDVGYRSEEEAWAAGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00362 393 Gene3D - 132 363 IPR015943 GO:0005515
Rops3g00362 393 PIRSF Photosystem_II_Ycf48-like 38 393 IPR016705 -
Rops3g00362 393 Pfam Photosynthesis system II assembly factor YCF48 70 391 IPR028203 -
Rops3g00362 393 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 74 392 - -
Rops3g00362 393 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 18 393 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00362 - - gmx:100810566 685.256