Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00359 ATGCCTCCCGCGCGTCGACGCGGACCGAACAAGGCGAAGGCCAATGGTCACTTGAGTTTGGGCGATCTCGTCCTCGCTAAGGTCAAGGGTTTCCCCGCTTGGCCTGCCAAGATAAGCAGGCCTGAAGATTGGGAGAAAACCGCTGATCCAAAGAAATATTTTGTTCAATTCTTTGGCACGAAAGAAATAGCTTTTGTTGCCCCTGCAGATATTCAGGCATTCACTAGTGAGTCTAAAAATAAGTTGTCTGCTCGTCTTCAAGGCAAGACAAAGTACTTTACCCAAGCTGTGAAGGAAATTTGCGCTGCGTTTGATGAGATTCAGAAACAGAAGGCTAGTGGTTTGACCGATGATACTGATGATTCTCGGACCGCCTCTGAGGCTCCTTCTGTTGATAGGGTAGTGGGTAATCCAAAGGATGCCACGGATGCTGTGGTAACAAATGCAGAAAAAGATGACATCCATATGGGTAACACTGGCTCTAATTTGGAGCTCTGTACACATAGATTTGGAGAAAGTGATAGCCAAGGTGAAAAGCTCTATGAATCTGGCCATCCAAATGAAAGTTCTTCTGTTCTTTCGCCTTTGATCAAAAGTAAATTATCCATTGGTTCAGAGCTAAAGAAGAATGCTAACAAATCTAATCTTAAAGTTACAAGTAGTGGTAATGATTATGGGCAAGATGATAATGGACACAGTGTTTTAACTAATGGCAGCAAGACAAGAAAGCTTGTTACTGGCTCAAAGAGGAGAAGTGAAGCTGCAGATGATAGAATTAAAAATGGTAGATCATCTACTGGAACATTTTTGATGGAGGGAAATTCTACTGGCAGTACTGATCTTTCCAGGTCTGGACAGACATTGAAAGCTGGGAAAAAAGAGAAAAATGCCTCGGCTGTTAAATCAGATTCTCCAGATACTCTTATATCAGACTCTAATGGTAATACTGGAGAAAAAGATAAGAACTTAACAACAATTAAAACAAATCTTGATGTGAAAAATGAGTTACAGGACATCACATTTGATTGTGAGGAGGCAGATGGCAAAAATTCTAGTATAGGAAAGAAGACCCAACTTCATGCAAAGCTTAATGTGGGAGCAAATGAATCTTTACATGCTACCAAGAAGTTGAAGCGTACAGATGCCAAAGATGAGTCAACTTTAGGATCCATCCCAAAAGATGGGAAAGGTGCTTCACCTGGCTCTACTGTTGTTGATGACAAAGCATTTAAAAAATTAGAGCTGAAAAGGTCCACATCAAATTTAAAAACAGAAAAAAGCTTGTCATCAAGGGGTCAAATTGGTGTTGTAGGTTCTGATGATTCTGGCCATGAGATGCTACCTGGGACCAAAAATCATAGCCAAGTTCGTCAAGCTAAGCCTGATTCTGCTAGCATTGCTTCTGATGAAATAAAAGAGCAGAGTACTCATGGACTGAAAGGTGATACAATTAATGTTATGACAAAACAAGTACGGAGGAAACGTAGAGCTGTATGCCTTTACGATGACGACGATGAACCTAAAACACCTGTTCATGGAGGAGCTGCCAAAAATATCAAGTCACCTTTTGTTTCAGAGGTTAAGAAGAGCAAAAATGCACACTTAGAGAAGTCTGATGTTGCTCAGCTGGCTCATAGAAATTCCAGTGAACTTGAGGATATCCATTTGAAAGAACCATCTTCTCAATTACATAAAGACACTTTATCAATTAAGCAGCCTCTAAAAGAGAAAGCTGATGAAGTCATTCCTGTGAGTGTTCCCCATAGTCATGATAAATTAGATTCAAAGCAGTTTCCCTCTAAGGTGGCAAAATTAAGCTCTGCCTCCCCAGTAAAATCACCTCAGTCAGTTCCTGCAACAAAATCAAATGCTGATCCTAATAAATCTTCCAAAACGTTGCTCAAAGTTTCCAGCAATGCTACTCTAAAGAAGGCTGATCATGGGACTTCAAAGTCTTTACATAACTTCAACTCTTCTCAGAATCAAGTTGCAACTCAAAAAAAGAAGCTAGTATCTTCGGCAGAAATTTCTAAAACTACTCCAAAGACGTTGCCACAGGCGGTTGAAGTCCCTGCCTCCACAGTTGGTTTTAACGAGCCTGATGTTCTACATGTTGATAGATTGGAATTGGGTATGGAAGAAAGAAGTAGTATATATACTTGTTCTGGGACTCCAGAAACTTCTAAAACTATGAAGCATCTTATTGCGGCTGCCCAGGCAAAAAGGAGACAAGCTCAATCTCATTGTCTTCCTTTTGGCATTCACAATGTTCAGGGGAGGACTCCTAGCCCCTCTACAGTTCAGCCTTTTCTGTCTGTCTCAAGTAATTTTGTACAGACAGATGTGCAGGGTTTTTATGAGCACACAACATTGGCTTCTCCACCAACTAATGAGCATCACTCTGCTTCTCGAAATCAACCTGATGCTGAAGAAATTGAGGAGAGAAGAGTCGGTTCAGTGCAAAGGGGTCTCGAGGGCTCGCTGAGTGGTGGTACAGAGGCTGCTGTTGCTCGTGATGCTTTTGAAGGAATGATTGAAACTTTGTCAAGGACCAAGGAAAGTATTGGGCGCGCAACTCGTCTTGCTATCGATTGTGCTAAGTATGGCATTGCCAATGAGGTTGTTGAACTTCTCATCCGAAAGCTGGAAAATGAAACTAGTTTTCATCGCAAAGTGGATTTGTTTTTTCTTGTTGATTCTATCACCCAGTGCTCGCATAATCATAAAGGCATTGCTGGAGCCTCCTACATCCCTACAGTTCAAGCAGCGTTGCCACGTCTTCTTGGTGCTGCTGCTCCCCCTGGAGCTAATGCCCGTGAAAATCGTCGTCAGTGTCTCAAGGTTTTGAGGCTGTGGCTTGAGAGGAAAATTTTGCCTGAATCAGTTCTTCGCCGTTACATGGATGATATTGGAGTTTCAAATGATGATACGACAGTTAGCTTTTCTTTCAGGCGTCCTTCTCGAGCAGAGCGATCTGTGGATGACCCAATTAGAGAAATGGAAGGCATGCTTGTCGATGAGTATGGAAGTAACGCTACATTCCAGCTGCCTGGCTTTCTATCTTCTAATGCGTTTGAAGAAGATGAAGATGAAGATGATTTACCAATCAATTCTTGTAAGGATACATATGGTGTGTCTCCAGCAGATCCCACACTTACCCTTGGAGAATCAGAAACTTCTACGGTTACCCCAAATGACAAGCGCCATTGTATTTTGGAGGATGTGGATGGTGAGCTAGAAATGGAAGATGTTTCAGGTCACCCGAAGGATGAAAGGCCTGTACATTTGAACAGTTCTGATGAAATTGCTTTGCAACTTCAGGGCTCAGATAGGAATTTAGATCCAACTTTAAACATTCCAGTAGAGATGTCAGCTACTCCGGAGGGTTCTCCTCCATTGCCACTTGATTCACCTCCTCCAACCCCACCTTTGCCTCCTTCTCCTCCACCACCTCCTCCTCCTCCATTATCTCCATTACCTCCCCCACCCCCACCGCCTCCAATATTACAACCCCCACCTCCTCCTTTACCACCCTCAGCCCCTTCAGTACCATTGGTCCCTCAATCATCGGGACTGGCTCGGCCTTCACTTCTCTCCCAGTCATTAATGCCACATCAGTCATCCCCACAATTGGGTTATCAGCAGAATGTATCTCATGACTTTAGTGGCACAACTAGTGGTAACCAAATAGTTCAAATGGCTGGAAGTTCTTTTTCTGGAGGTCACAATAATGCAGTTGTTAATAATGAAATATTTCCACAGCCATCTGCTTTTGCCTCAACTGCAGGCTGCAGCTCCCAGGAACCTTCTGGTTTTAACCCTTCCAGGCAATTAGAATACGGACAGAATGATGTGTATTTAAATGCTCAAGTTCCTCAACCTAACCATCAATATCAGCAGGGTAACCTCCCATTTGCTCAGAGACATGCACATCCTGCCCCACCCCAAAATCTATCAAATCAGTACTCATATCCAAATCATACTGTTCAGCAACATCTTCCACATTCATTTCATCCTCCCATCCCTTTACCATCCCTTCCCGATGGCCGAAGGCAATTTGTTGCTGATGAGCAATGGAGAATGTCATCAAATGAATTTAAAACAAACAATCAACATGGTGTATGGGGAGGGAGAAATCCTTCATGCCCTGGTCCACCCTTTGGGCAAGAAGGTCATTTCCGACCACCACTTGAAAGGCCACCACCAGTAAGCAGTGTAGGTTTTCCGCGAGCAATTTCAAGCAACTTACCTGGTGTTCCAATATCAGGACATGGTGTTCCTCAGATTTTGCCTTTATTAATGGTGTTGCTGGTGGATCAACATGCAAGGTTACATATTGTGCCTCAAAGTTTGGCGCATGTTTCTGACTTGGTTTTGGCAAAACAAAGATGGTGA 4395 0.4305 MPPARRRGPNKAKANGHLSLGDLVLAKVKGFPAWPAKISRPEDWEKTADPKKYFVQFFGTKEIAFVAPADIQAFTSESKNKLSARLQGKTKYFTQAVKEICAAFDEIQKQKASGLTDDTDDSRTASEAPSVDRVVGNPKDATDAVVTNAEKDDIHMGNTGSNLELCTHRFGESDSQGEKLYESGHPNESSSVLSPLIKSKLSIGSELKKNANKSNLKVTSSGNDYGQDDNGHSVLTNGSKTRKLVTGSKRRSEAADDRIKNGRSSTGTFLMEGNSTGSTDLSRSGQTLKAGKKEKNASAVKSDSPDTLISDSNGNTGEKDKNLTTIKTNLDVKNELQDITFDCEEADGKNSSIGKKTQLHAKLNVGANESLHATKKLKRTDAKDESTLGSIPKDGKGASPGSTVVDDKAFKKLELKRSTSNLKTEKSLSSRGQIGVVGSDDSGHEMLPGTKNHSQVRQAKPDSASIASDEIKEQSTHGLKGDTINVMTKQVRRKRRAVCLYDDDDEPKTPVHGGAAKNIKSPFVSEVKKSKNAHLEKSDVAQLAHRNSSELEDIHLKEPSSQLHKDTLSIKQPLKEKADEVIPVSVPHSHDKLDSKQFPSKVAKLSSASPVKSPQSVPATKSNADPNKSSKTLLKVSSNATLKKADHGTSKSLHNFNSSQNQVATQKKKLVSSAEISKTTPKTLPQAVEVPASTVGFNEPDVLHVDRLELGMEERSSIYTCSGTPETSKTMKHLIAAAQAKRRQAQSHCLPFGIHNVQGRTPSPSTVQPFLSVSSNFVQTDVQGFYEHTTLASPPTNEHHSASRNQPDAEEIEERRVGSVQRGLEGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLENETSFHRKVDLFFLVDSITQCSHNHKGIAGASYIPTVQAALPRLLGAAAPPGANARENRRQCLKVLRLWLERKILPESVLRRYMDDIGVSNDDTTVSFSFRRPSRAERSVDDPIREMEGMLVDEYGSNATFQLPGFLSSNAFEEDEDEDDLPINSCKDTYGVSPADPTLTLGESETSTVTPNDKRHCILEDVDGELEMEDVSGHPKDERPVHLNSSDEIALQLQGSDRNLDPTLNIPVEMSATPEGSPPLPLDSPPPTPPLPPSPPPPPPPPLSPLPPPPPPPPILQPPPPPLPPSAPSVPLVPQSSGLARPSLLSQSLMPHQSSPQLGYQQNVSHDFSGTTSGNQIVQMAGSSFSGGHNNAVVNNEIFPQPSAFASTAGCSSQEPSGFNPSRQLEYGQNDVYLNAQVPQPNHQYQQGNLPFAQRHAHPAPPQNLSNQYSYPNHTVQQHLPHSFHPPIPLPSLPDGRRQFVADEQWRMSSNEFKTNNQHGVWGGRNPSCPGPPFGQEGHFRPPLERPPPVSSVGFPRAISSNLPGVPISGHGVPQILPLLMVLLVDQHARLHIVPQSLAHVSDLVLAKQRW* 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00359 1464 Gene3D - 832 977 IPR008942 -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 174 193 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 420 476 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 301 321 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 246 260 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 1037 1064 - -
Rops3g00359 1464 Gene3D - 10 114 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 214 243 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 112 127 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 803 820 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 112 137 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 372 390 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 585 633 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 422 436 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 214 321 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 261 286 - -
Rops3g00359 1464 CDD PWWP_HULK 21 110 - -
Rops3g00359 1464 Pfam PWWP domain 21 104 IPR000313 -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 790 829 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 1131 1184 - -
Rops3g00359 1464 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Rops3g00359 1464 Pfam CID domain 840 964 IPR006569 -
Rops3g00359 1464 SMART PWWP_4 18 75 IPR000313 -
Rops3g00359 1464 ProSiteProfiles CID domain profile. 833 974 IPR006569 -
Rops3g00359 1464 SMART 558neu5 840 971 IPR006569 -
Rops3g00359 1464 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1082 - -
Rops3g00359 1464 SUPERFAMILY Tudor/PWWP/MBT 13 110 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 448 476 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 370 404 - -
Rops3g00359 1464 FunFam Enhancer of ag-4 2 833 976 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 1106 1191 - -
Rops3g00359 1464 MobiDBLite consensus disorder prediction 600 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00359 Rops-Chr3 4467145 4490541 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00359 - - lja:Lj3g3v3523870.1 1972.98