Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00357 ATGGAGAGGAAAGAGAGAGTGAGAAAGGCAGAGGCACTGGTAGAGAAAGCCATGGAAGGGAACGATGCTTCTCACGATGCAGCACATGTTTGGAGGGTTCGAGATCTTGCTCTTTCCCTTGCCTCCGAGGAAGGACTCTCTTCTGACCCTGACTCCGTGGAAATCGTAGAGCTAGCTGCACTGCTCCATGATATAGGTGACTACAAATACCTGAGGGATCCATCTGAGGAAAAAACTGTTGAGAATTTCCTCGAGGAAGAGGGAGTTGAGGAGAACAAGAAGTCTAAAATTTTGAAGATCATCAAAGGGATGGGCTTCAAAGAGGAAGTGACAGGAAAGGGAAATAGTGAATGGTTTCCAGAATTTGGAGTTGTGCAAGATGCTGATCGACTTGATGCTATTGGTGCTATAGGAATTGCACGTTGCTTCACCTTTGGTGGGAGTAGGAAGCGGGTGCTGCATGATCCTGCCATTCCACCACGATCTGTTTTATCAAAGGAGCAATACATGAACAAAGAGGAGCAAACTACTATTAATCACTTTCATGAGAAGCTTCTCAAGCTCAAAGATATGATGAAAACCAAGTCTGGGCAGAGGAGGGCTGAGAGAAGGCACAAGTTCATGGAGGAGTTTGTGAAAGAGTTTTATGACGAATGGAATGGTTTATGCTAA 672 0.4524 MERKERVRKAEALVEKAMEGNDASHDAAHVWRVRDLALSLASEEGLSSDPDSVEIVELAALLHDIGDYKYLRDPSEEKTVENFLEEEGVEENKKSKILKIIKGMGFKEEVTGKGNSEWFPEFGVVQDADRLDAIGAIGIARCFTFGGSRKRVLHDPAIPPRSVLSKEQYMNKEEQTTINHFHEKLLKLKDMMKTKSGQRRAERRHKFMEEFVKEFYDEWNGLC* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00357 223 SUPERFAMILY HD-domain/PDEase-like 3 221 - -
Rops3g00357 223 Pfam HD domain 28 133 IPR006674 -
Rops3g00357 223 CDD HDc 25 138 IPR003607 -
Rops3g00357 223 Gene3D - 106 222 - -
Rops3g00357 223 Gene3D - 2 103 - -
Rops3g00357 223 PANTHER SUPERFAMILY HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G03035)-RELATED 1 221 - -
Rops3g00357 223 SMART hd_13 22 143 IPR003607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00357 Rops-Chr3 4444748 4446816 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00357 K06950 - gmx:100500273 362.073