Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00342 ATGGAATTGGCATGGTTGAGTGCCATTTTGGTGGGGGCTGGTTATCTTGCTTTGGGTTACTTCATTGGTTCTCAGTATCCCCCTCGTTTTCTCTTCTCTCATAGATTATTAACTAAAGATAAAGAAGACCCTCCACTTTTGAACGATGACAACAACAATAAGAAGAAGAGCAAGTCCAAACTCAAAGACCCACTTGAGATTGAACAGCTCGCTGACATTCTCGATGATTTTAAGATGATACTCGTTGTCAGAAATGATCTTAAAATGGGCAAAGGAAAGATTGCTGCTCAATGCAGTCATGCAACGTTGGGTCTCTATAAAAAGCTCCTCTATCGAGCACCAAAGTCTTTGAATAGGTGGGAGATGTGTGCTCAGCCTAAGGTTGTTGTCAAAATTGAAAGTGAAGAAGATATGCTGGCTTTGCAAGAAAGGGCTAAATCTTTGAAGTTACCCACCCATATCACAATTGATGCTGGGAGAACACAGATTGCACCAAATTCCAGAACAGTGATGGCAATTCTTGGACCAGTTGACGTTGTAGATGAGGTAACAGGTGGACTGAAACTACTATAG 573 0.4154 MELAWLSAILVGAGYLALGYFIGSQYPPRFLFSHRLLTKDKEDPPLLNDDNNNKKKSKSKLKDPLEIEQLADILDDFKMILVVRNDLKMGKGKIAAQCSHATLGLYKKLLYRAPKSLNRWEMCAQPKVVVKIESEEDMLALQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVDVVDEVTGGLKLL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00342 190 CDD PTH2 77 190 IPR002833 GO:0004045
Rops3g00342 190 FunFam Peptidyl-tRNA hydrolase 2, mitochondrial 75 190 - -
Rops3g00342 190 Pfam Peptidyl-tRNA hydrolase PTH2 77 190 IPR002833 GO:0004045
Rops3g00342 190 PANTHER PEPTIDYL-TRNA HYDROLASE 2 12 190 IPR002833 GO:0004045
Rops3g00342 190 Gene3D Bit1 75 190 IPR023476 -
Rops3g00342 190 SUPERFAMILY Peptidyl-tRNA hydrolase II 75 190 IPR023476 -
Rops3g00342 190 NCBIfam aminoacyl-tRNA hydrolase 78 190 IPR002833 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00342 Rops-Chr3 4268822 4272778 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00342 K04794 - gmx:100527794 308.916