Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00338 ATGAAGATTTTCACCCAGCGCCAAGGAGCACTTCTGTGCTTCTGGTTGTCTGTGCTTTTTGTGGTGGTGGGGTTTTGCCATGGAGACAGTAGTACAGTAGAGGTAGTTGGACTGGGAGAATGCGCTGATTGCAAGGAGAACAGTATTAAAACTAGTCAGGCTTTCTCAGGGCTACGTGTAACAGTAGATTGCAAGGCAGGAAATGGACACTTCAAAACGAGAGGGGCTGGTGAGCTTGATAAAAATGGAAACTTCAAAGTATCCCTTCCTCAAGACATTGTAGAAGCCGGAGGATTGAAAGAAGAATGCTATGCTCAGCTACATAGTGCATCAGCTGCTCCTTGTCCTGCCCATGATGGCCTCCATAGCACCAAAATTGTCACCAAGTCAAAAACTGATGACAAACACACCCTTGGTCTTGCTGGGAAACTCAAATTTTCATCAGTTACCTGCACTTCAGCATTTTTTTTGCCTTTCTTCAAACACCCTTGGCCTAAGCTTCCCCATCCACATATTCCCCCCTTCCATTTTCCACCCAAATTTAAGCACCCTTTACTTCCTCCAGTGCCTATCTATAAAAAACCTCTTCCACCTCCTGTGCCAATCTACCAGCCACCTCTACCTCCACCTGCCCCGGTCTACAAGGAACCTCTTCCTCCACCTGTTCCAATATATAAACCCCTTCCTCCACCTGTGCCAGTATATAAGAATCCTCTTCCTCCTCCGGTCAAGAAGCCGTGTCCACCACCGGTTCCAATCGAGAAGCCAAGTCCACCACCGGTTCCTATCAAGAAGCCATGTCCACCACCGGTTCCAATCAAGAAGCCAAGTCCACCACCGGTTCCAATCAAGAAGCCATGTCCACCACCGGTTCCAATCAAGAAGCCAAGTCCACCACCGGTTCCAATCAAGAAGCCATGTCCACCACCTGTTCCAATCAAGAAGCCAAGTCCACCACCGGTTCCAATCAAGAAGCCAAGTCCACCACCGGTTCCAATCAAGAAGCCATGTCCACCAAAGATTGAGCATCCAGTTCTACCACCGGTTCCAAAGAAACCACTTCCACCTCCCATTCCCATTTACAAGCCACCACTTCCTCCTCCTGTTCCAATTTACAAACCTCTTCCTCCTCCTGTTCCAATTTACAAACCTCTTCCTCCTTTCCCAAAGTTGCCACCATTCAAGAAGCCGCCATGTCCACCTCTTCCCAAGTTCCCTCCAAAGCACTTCTTCCATCATCCCAAGTTTGGAAAATGGCCTCCATTGCCTCCAAAGAGCTTTTTCCATCACCCCAAGTTTGGAAAATGGCCTCCACTACCACCTTTTACTCCTCCTCATCCTTAA 1344 0.4836 MKIFTQRQGALLCFWLSVLFVVVGFCHGDSSTVEVVGLGECADCKENSIKTSQAFSGLRVTVDCKAGNGHFKTRGAGELDKNGNFKVSLPQDIVEAGGLKEECYAQLHSASAAPCPAHDGLHSTKIVTKSKTDDKHTLGLAGKLKFSSVTCTSAFFLPFFKHPWPKLPHPHIPPFHFPPKFKHPLLPPVPIYKKPLPPPVPIYQPPLPPPAPVYKEPLPPPVPIYKPLPPPVPVYKNPLPPPVKKPCPPPVPIEKPSPPPVPIKKPCPPPVPIKKPSPPPVPIKKPCPPPVPIKKPSPPPVPIKKPCPPPVPIKKPSPPPVPIKKPSPPPVPIKKPCPPKIEHPVLPPVPKKPLPPPIPIYKPPLPPPVPIYKPLPPPVPIYKPLPPFPKLPPFKKPPCPPLPKFPPKHFFHHPKFGKWPPLPPKSFFHHPKFGKWPPLPPFTPPHP* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00338 447 PRINTS Proline rich extensin signature 201 222 - -
Rops3g00338 447 PRINTS Proline rich extensin signature 227 243 - -
Rops3g00338 447 PRINTS Proline rich extensin signature 165 181 - -
Rops3g00338 447 PRINTS Proline rich extensin signature 245 262 - -
Rops3g00338 447 PRINTS Proline rich extensin signature 187 199 - -
Rops3g00338 447 Pfam Pollen protein Ole e 1 like 35 119 - -
Rops3g00338 447 MobiDBLite consensus disorder prediction 295 329 - -
Rops3g00338 447 PANTHER OS10G0148100 PROTEIN 8 238 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00338 - - aprc:113865229 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00338 3 4211278 4213310 Rops3g00338 3 4211278 4213310 ECH