Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00326 ATGGGGAGTGTTTCGTCTGAAGATGGTTCTGACCGTTGCGGTAGTTACAGTCCGAGTGCTGACATCAGCGAATCGGAGAGTTGCAGCAGTTTCTGCGGCCGCCGTTTCGACGCCGAGGGAGCCTCCAGCTCTGCCAATCTCTCGCCGCGTCCCCTCGCCGCTCATTTCAACTTCCCGCAGGCGCAGGTAATGCTGCCAGTCATCGGAGGCAAAGACGTCGTCGTTTGGGATCACAAGCGTGACTTGGATTTGTCCGAAGTGGAAATGATGAAGGAGAGGTTCGCGAAGCTGCTTCTTGGGGAAGACATGTCTGGTGGGGGAAAGGGGGTTTGCACTGCACTTGCAATCTCTAATGCAATAACAAATCTCTCTGCAACTGTGTTTGGTGAGCTATGGAGGTTGGAGCCTTTGGCACCACAGAGGAAAGCCATGTGGCGAAGGGAAATGGAATGGCTTCTATGTGTGAGTGATTCCATAGTGGAGCTTGTGCCTTCTGTGCAGCAGTTTCCTGGTGGTGGAACCTATGAAGTGATGGCCACGCGTCCTCGTTCAGATTTGTACATCAATCTTCCTGCTTTGAAGAAGCTTGATGGGATGCTGATTAGTATGCTTGATGGGTTTCATGATACTAAGTTTTGGTATGTTGATAAGGGGATTATATTGGGTGATTCCAAGGATTGTGATGACTATGGTAGACCTTCGGTTAGGCAAGAGGAGAAATGGTGGCTTCCATCTCCTAAGCTTCCCCCAAATGGGTTGTCTGAGGATGATAGGAAAAGGTTGCAGCAGTGTAGGGATTGCACCAACCAGATATTGAAGGCTGCCATGGCAATTAATAGTTCTGTTCTTGCTGAAATGGAAATTCCTGGCGCCTATGTCGAATCCTTGCCCAGGACTGGAAAAGCTTGTCTAGGGGATATAATCTATCGATACATAACTGCTGACAAGTTCTCACCTGAATGTCTCCTTGATTACCTGGATCTTTCATCAGAGCATCAGACTCTGGATATAGCTAATAGAATTGAGGCTGCTGTGCATGTATGGAGGCTGAAGGACCATAAGAAACATCTAAATTCAGTGAAAGGCAGACGGTCTTGGGGTGGAAAGGTGAAGGGCCTTGTTGCTGACGGTGAAAAGAACCAATTTCTTGCCCAACGGGCAGAGACACTTCTACAAAGCTTGAAACATCGATTTCCAGGGCTCCCTCAAACAGCACTAGATATGGCCAAAATACAATATAATAAGGATGTAGGACAGTCTATTCTTGAAAGTTACTCGAGGGTGATGGAGAGCTTGGCCTTTAACATAATGGCGAGGATTGATGATGTCCTTTATGTAGATGATACCATTAAACGATGCGCAGCTGCAGATTCTATGCCTCTATTCAGCAGGGGAGGTTTTGGTGGTCTCCCAATCCTGAAGCGAATGTCTCCCAGCCCCTTCTCAATTCAACACACCCCATATGCCTCTCCATTTGCAACCCCAACATTCTGTTCCTCCTCTCCTGTTACCGGGAGCCCTTGCAGTCCACGGAGGACACACACTGTGAAGAGAAATGCTCAGGCAACAGAATCTAAGGCCGAAAAGGTGGCCGCAGCTGATTTTGAGAGGATATGGTCATACAGGGGAAACCTCAGCTCAAGAAGAGCTTCTGGCGATGCTCCGGAAAGGGACTGA 1677 0.4854 MGSVSSEDGSDRCGSYSPSADISESESCSSFCGRRFDAEGASSSANLSPRPLAAHFNFPQAQVMLPVIGGKDVVVWDHKRDLDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQRKAMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLISMLDGFHDTKFWYVDKGIILGDSKDCDDYGRPSVRQEEKWWLPSPKLPPNGLSEDDRKRLQQCRDCTNQILKAAMAINSSVLAEMEIPGAYVESLPRTGKACLGDIIYRYITADKFSPECLLDYLDLSSEHQTLDIANRIEAAVHVWRLKDHKKHLNSVKGRRSWGGKVKGLVADGEKNQFLAQRAETLLQSLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDTIKRCAAADSMPLFSRGGFGGLPILKRMSPSPFSIQHTPYASPFATPTFCSSSPVTGSPCSPRRTHTVKRNAQATESKAEKVAAADFERIWSYRGNLSSRRASGDAPERD* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00326 558 ProSiteProfiles PRONE domain profile. 77 457 IPR005512 GO:0005085
Rops3g00326 558 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 30 474 IPR038937 GO:0005085
Rops3g00326 558 FunFam Rop guanine nucleotide exchange factor 14 319 456 - -
Rops3g00326 558 FunFam Rop guanine nucleotide exchange factor 1 78 318 - -
Rops3g00326 558 MobiDBLite consensus disorder prediction 503 526 - -
Rops3g00326 558 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 85 451 IPR005512 GO:0005085
Rops3g00326 558 Gene3D PRONE domain, subdomain 1 77 319 - -
Rops3g00326 558 Gene3D PRONE domain, subdomain 1 320 457 - -
Rops3g00326 558 FunFam Rop guanine nucleotide exchange factor 2 287 413 - -
Rops3g00326 558 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00326 Rops-Chr3 4117298 4120508 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00326 - - gmx:100789706 1016.53