Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00322 ATGAAGCTGATCAATGACCCACCACAACTACGTGCCCTTCTGAGTTTCTGCTCAATATTGCTGCTTTTGAATGTTGTTCGTGTTGCTGCAGAGGACCCTTATAGATTCTTCGACTGGACCATTACCTATGGAGACATTTATCCCCTTGGAGTTAAACAACAGGGCATTCTTATCAATGGCCAATTTCCAGGCCCTGAAATCTACTCTGTTACCAATGACAATTTGATCATAAATGTACACAATAAGTTGCCCGAGCCGTTTCTTCTATCATGGAGTGGTGTTCAGCAAAGGAGAAATTCTTATCAAGATGGAGTTTATGGAACCACATGCCCCATCCCTCCTGGCAAGAACTTTACTTACACACTTCAAGTCAAAGATCAAATTGGAAGCTTCTTCTATTTCCCATCACTTTCTTTCCACAAAGCAGCTGGTGGCTTTGGTGCTATCAAAATCCTCAGCAGGCCAAGGATTCCAGTCCCATTCCCTGACCCGGCTGGTGATTTCAGCATTCTTATTGGAGATTGGTACCAAATCAATCACTCGAAGCTGAGGAGAGTTCTAGATTTTGGACACAGACTTCCATTCCCTCAAGCTGTTCTTATCAATGGTCGTGCAAACGGTACCTCATTCACAGTTCAACAAGGGAAAACATACAGGCTTAGAATATCAAATGTTGGACTTCAAAACACACTCAACTTTAGGATTCAAGGCCACACAATGAAATTGGTGGAAGTTGAGGGAACTCACACTGTACAAACCAAATATTCCTCAATAGATGTTCATGTGGGACAGTCTTATTCTGTGCTTATCACTGCTGATCAAGCACCCAAGGACTACTACATTGCAGTTTCAACTCGTTTCACTAACCGGGTCCTCACAAGCACTGCAACCCTTCACTACAGTAACTCCCAGCAATCTGTTTCTGGCCCAATTCCTGGTGGACCAACCACTCAAATCGATTGGTCCATCCAACAAGCTCGTTCAATCAGGACAAACTTGACTGCAAGTGGACCAAGGCCAAATCCACAAGGCTCCTACCACTATGGTCTCATAAACATTAGCAGGACAATCAAGCTAGAGAGCTCAGCAGCACAAGTCAATGGCAAGCAAAGATATGCAGTCAACAGTGTTTCCTTTAAACCAGCTGACACTCCTCTGAAGCTAGCTGATTACTTCAAGATTGGTGGTGTTTTCCAAGTTGGAAGCATCCCAGATACCCCTTCTGGCAAACCTATGTATCTTGATACATCAGTCATGGGTGCTGATTTTAGAGCCTTCGTTGAGATAGTGTTTCAAAACCATGAAAACATCATGCAGAGCTGGCACATTGATGGATACTCATTTTGGGTTGTAGGAATGGACGGTGGTGTGTGGACTCCTAATAGTCGTAACCAGTACAACCTCAGAGATGCAGTATCGAGGTCCACAGCACAGGTATATCCAAAGTCATGGACTGCAATTTATATGGCGCTGGACAATGTGGGTATGTGGAATGTGAGGAGTGAATTTTGGGCACGCCAGTACCTTGGACAACAGTTCTATCTGAGAGTATATTCACCAGTTGAATCCATCAGGGATGAATATCCAATTCCAAAGAATGCTCTTCTCTGTGGCAAAGCTGCAGGCAGAGCAACCAGACCACTATGA 1647 0.4414 MKLINDPPQLRALLSFCSILLLLNVVRVAAEDPYRFFDWTITYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVHNKLPEPFLLSWSGVQQRRNSYQDGVYGTTCPIPPGKNFTYTLQVKDQIGSFFYFPSLSFHKAAGGFGAIKILSRPRIPVPFPDPAGDFSILIGDWYQINHSKLRRVLDFGHRLPFPQAVLINGRANGTSFTVQQGKTYRLRISNVGLQNTLNFRIQGHTMKLVEVEGTHTVQTKYSSIDVHVGQSYSVLITADQAPKDYYIAVSTRFTNRVLTSTATLHYSNSQQSVSGPIPGGPTTQIDWSIQQARSIRTNLTASGPRPNPQGSYHYGLINISRTIKLESSAAQVNGKQRYAVNSVSFKPADTPLKLADYFKIGGVFQVGSIPDTPSGKPMYLDTSVMGADFRAFVEIVFQNHENIMQSWHIDGYSFWVVGMDGGVWTPNSRNQYNLRDAVSRSTAQVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYLRVYSPVESIRDEYPIPKNALLCGKAAGRATRPL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00322 548 Gene3D - 25 152 IPR008972 -
Rops3g00322 548 SUPERFAMILY Cupredoxins 161 340 IPR008972 -
Rops3g00322 548 Gene3D - 165 339 IPR008972 -
Rops3g00322 548 Gene3D - 349 544 IPR008972 -
Rops3g00322 548 CDD CuRO_1_AAO_like_1 36 151 IPR034273 GO:0005507
Rops3g00322 548 CDD CuRO_3_AAO_like_1 381 502 IPR034275 GO:0005507
Rops3g00322 548 FunFam Monocopper oxidase-like protein 165 338 - -
Rops3g00322 548 FunFam L-ascorbate oxidase homolog 34 155 - -
Rops3g00322 548 Pfam Multicopper oxidase 384 519 IPR011706 GO:0005507|GO:0016491
Rops3g00322 548 PANTHER MULTI-COPPER OXIDASE 53 513 IPR045087 -
Rops3g00322 548 FunFam Monocopper oxidase-like protein 350 546 - -
Rops3g00322 548 SUPERFAMILY Cupredoxins 28 180 IPR008972 -
Rops3g00322 548 SUPERFAMILY Cupredoxins 350 539 IPR008972 -
Rops3g00322 548 Pfam Multicopper oxidase 168 302 IPR001117 -
Rops3g00322 548 Pfam Multicopper oxidase 41 154 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00322 Rops-Chr3 4094490 4098497 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00322 - - gmx:100793934 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00322 3 4094490 4098497 Rops3g00322 3 4094490 4098497 ECH