Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00319 ATGAGAGGAGGAGGAGGAAGAATGCACAGAAAAACTGATTCAGAGGAGACGAGCAATAGCATGGAGCAATCGTCGTCGTCGCCGCCGCGTTCCCCTCCCCGGCGACCACTGTACTACGTTCAGAGCCCCTCAAACCACGACGTTGAGAAAATGTCTTATGGTTCAAGCCCTGTTGGTTCACCACACCACCATTTTCATTACTACCTTTCGTCACCCATTCACCACTCTCGTGAGTCCTCAACTTCTCGCTTCTCTGCTTCTCTAAAAAACCCTCGCCACCCTTCTTCCTCATGGAAGAAACTCCACCCCTACAACAACAACGACGACGACGGCCTTGATGAAGACGACGACGTCGTTCACGACTCTTCCCGCAACATACGCTTGTATCTCTGTTTCATCTTGCTTTTTGTTTTGCTTTTCACCCTCTTCTCTTTGATTCTCTGGGGTGCCAGCAAGAGTTACAAGCCTCGAGTCATCGTTAAGAACATAGTGTTCGAGAACTTGAATGTACAATCGGGGAACGATGCGACGGGGGTACCAACAGATATGTTGTCGTTGAACTCAACGGTCAGGATCTTATATAGAAATCCTGCCACTTTCTTCGGTGTTCACGTTACTTCCACTCCTCTTGAGCTTAGCTACTACCAGCTCACGTTAGCCTCAGGCCAGATGCAGCAGTTTTATCAGTCAAGGAAGAGTCAGCGGAGGGTAGCGGTAGTGGTTTTTGGGCACCAGGTTCCACTCTATGGTGGGGTGTCAGTTCTTGGGAACACTAAAAAACATTTGGAAAATGTTGCATTGCCAATGAACCTGACATTTACAGTGAGATCAAGGGCTTTCATCTTGGGAAGATTGGTCAAGTCTAAATTCTATCGAAGAATCAGATGTTCTATCACTTTGCATGGCAACAAAATGGGAAAACCTCTTAATTTGACGGATTCATGTGTCTACAAGTGA 957 0.4713 MRGGGGRMHRKTDSEETSNSMEQSSSSPPRSPPRRPLYYVQSPSNHDVEKMSYGSSPVGSPHHHFHYYLSSPIHHSRESSTSRFSASLKNPRHPSSSWKKLHPYNNNDDDGLDEDDDVVHDSSRNIRLYLCFILLFVLLFTLFSLILWGASKSYKPRVIVKNIVFENLNVQSGNDATGVPTDMLSLNSTVRILYRNPATFFGVHVTSTPLELSYYQLTLASGQMQQFYQSRKSQRRVAVVVFGHQVPLYGGVSVLGNTKKHLENVALPMNLTFTVRSRAFILGRLVKSKFYRRIRCSITLHGNKMGKPLNLTDSCVYK* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00319 318 MobiDBLite consensus disorder prediction 80 104 - -
Rops3g00319 318 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 120 302 - -
Rops3g00319 318 MobiDBLite consensus disorder prediction 1 17 - -
Rops3g00319 318 MobiDBLite consensus disorder prediction 1 57 - -
Rops3g00319 318 Pfam Late embryogenesis abundant protein 192 297 IPR004864 -
Rops3g00319 318 MobiDBLite consensus disorder prediction 80 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00319 Rops-Chr3 4074770 4080184 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00319 - - gmx:100817846 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00319 3 4074770 4080184 Rops3g00319 3 4074770 4080184 ECH