Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00318 ATGGGAGAAGAGGGTCAAGCTCAATATTTCAGATCAGAAATGGCTATGCCGCAATACTCTGATGGTAGCTCCAAACACATTCATTCATCCACTCCGCAAGTCCACCCTTATGCCTCTGATTCTGATCGCTCCCCTTTACCCATTGTCCAGCATCAGCAGAATCAACATCCAAAAGATGAGTGCCTTCCTATTACTGAATCAAGAAATGGGAATTCCTACTTTGCAGCCTTTCATATTCTTAATTCCAACATTGGATTTCAAGCTCTCATGCTTCCGGTTGCCTTTGCCACTCTTGGTTGGGCATGGGGTACTGTATGTTTGTCAGTAGCATTTATTTGGCAGCTCTATACCATATTTCTCCTTATTCAACTTCATGAATCTGTTCCTGGAATTCGTCACAGCAGATACCTCTTCCTTGCCATGGCTGCCTTCGGTGAAAGGTTAGGAAAGGTGGCAGCATTATTCCCGGTAATGTACCTTTCAGGAGGTGCCTGCGTCTTGTTTATCATCACTGGTGGTGGGACCATGAAGCAATTATTCAAGATTCTTTGCAACAACGATCATGGGCATACATGTGACGCACACTCACTCACCGGGGCTGAGTGGTTCTTGGTGTTTACTTGCGTGGCCATTCTCATAGCTCAATTGCCCAACCTTAACTCAATGGCTGCTGTCTCTCTCGTGGGTGCCGTCACTTCCATCACTTATTGCACCCTCTTTTGGTTCCTCTCTGTTAAGAAGGGTAGGCCTACAACTGTATCCTACAATCCCTCCCTGTCACAAGACTCCACAATGGCTAAGATCAGTGACATTCTCAATGCCATTGGAATCATTGTGCTAGCTTTTAGAGGACACAATGTTTTGCTCGAGATACAGGCAAGGGACACTGCCTTCAAATTTCAAAGAAACATCAAAAGCACCAATGCGCAGAGGAGTGGGCATTTCATATTTACTCATTGCCATGTGCGTGTTTCCCCTCGCAATTGCAGGATTCTGGGCTTATGGAAACAAGATACCTTCAAATGGAGGGTTGTTAACTGCCTTCCCACAATTCCACAGGAATCAAGTAACGAAATTCTCAATGGGAGCAATGTATCTTCTGCCATCAAGAAACCTCGTAAAAGGGGTGCAGTATGGTGCTTCAACGTTGTACTTGGTTGCTTAGGGATGTTTCTCAGTGTTCTTTTGGTGGCTGCGGCTATTAGGACTCTAGCTGATAAAGGCCTACATGCTAACTTCTTCAAACCATAA 1251 0.4508 MGEEGQAQYFRSEMAMPQYSDGSSKHIHSSTPQVHPYASDSDRSPLPIVQHQQNQHPKDECLPITESRNGNSYFAAFHILNSNIGFQALMLPVAFATLGWAWGTVCLSVAFIWQLYTIFLLIQLHESVPGIRHSRYLFLAMAAFGERLGKVAALFPVMYLSGGACVLFIITGGGTMKQLFKILCNNDHGHTCDAHSLTGAEWFLVFTCVAILIAQLPNLNSMAAVSLVGAVTSITYCTLFWFLSVKKGRPTTVSYNPSLSQDSTMAKISDILNAIGIIVLAFRGHNVLLEIQARDTAFKFQRNIKSTNAQRSGHFIFTHCHVRVSPRNCRILGLWKQDTFKWRVVNCLPTIPQESSNEILNGSNVSSAIKKPRKRGAVWCFNVVLGCLGMFLSVLLVAAAIRTLADKGLHANFFKP* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00318 416 MobiDBLite consensus disorder prediction 18 38 - -
Rops3g00318 416 MobiDBLite consensus disorder prediction 18 43 - -
Rops3g00318 416 PANTHER OS05G0424000 PROTEIN-RELATED 72 294 - -
Rops3g00318 416 Pfam Transmembrane amino acid transporter protein 75 293 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00318 Rops-Chr3 4065099 4069679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00318 49 335 Organic Solute Cotransporters AT1G47670 51.389 3.28e-95 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00318 K26385 - gmx:100793408 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00318 3 4065099 4069679 Rops3g00318 3 4065099 4069679 ECH