Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00311 ATGGAAGAAGAGACAAAAGTCATTTCAGAAGTTCCAGTGACAAAGGTTGTTGAGGAGGCGGTGCATAAAGATGATAACATTAAGAAAACAAATGGAGATTTGCCTCAGGTAAAAGGCGAAGGAAAGAAAGAAGAGGAAGAGAATGCCTTTGATGGAGAATTCATTAAAGTTGAGAAGGAAGAGAATGCCTTAGATGATAAGTCTCACAACACTGAAAGAAGCTCAGATCCTCCGAGCAGGGAATTTCTAGAAGCACAAGAGAAGATACAGGAGCTCGAGGTTGAACTACAACGACTAGCTGATTCTTTAAAGACCTCTGAACATGAAAATGCTCAGCTGAAGGGAGATATCTCAGTTACAAAAGAGAAATTGGAGGAAAGTGAAAAGAAATACGAAGAGCTTGAACTGAGTCACAAGAAATTGCAAGAGCAGATTATTGAAGATGAGAAAAAGTATAATCTGCAGCTCGGCACTCTTGAAGAGGCACTGAAAAGTCAAGAAGAGAATCAGAAAGAGCTTCTTCATGTAAAGGAAGCGTTTGATGCTATGAACCTTGAGCTTGAAAGCTCTAGAAAGAAGATGCAGGAATTGCAGCAAGAGCTGCAACTTTCTGCAGATGAGGCACAGAAGTTTGAGGAGCTGCACAAGCAAAGTGGTTCACATGCTGAATCTGAGGGAAAGAAGGCCTTAGAATTTGAGAGACTACTTGAAGAAGCAAAATTGAGTGCAAGAGGAATGGAAGAAGAGATGACTTCCTTGAAGGAAGAATTGAAAGGAGTTTATGATAAGATTGCTGAAAATCAAAAGGTTGAAGAAGCACTCAAAACAACTGCGGCAGAACTCTCTACCATCCAAGAGGAGTTGACACACTCAAAATCCCAGCTATTGGAAGTTGAGCAAAGACTATCTTCAAGGGACTTTTTAGTAGATGAGTTGACCCAGGAATTAAACCTGAGAAAGACTTCAGAAACTCAGCTAAAGGAAGACATGTCAGCACTTCAAAATCTATTTGCCTCTACAAAGGAAGAACTGCGAGAAAAAGTTTCCGAGTTGGAAACTGCAAGGCTCAAGCTGCAGGAGGAGGAAAAATTGAGGGAATCAATTGAAGTTGCATTCAAGAGTCAGGAAGCACAGTTTCTCTCTGTACAGGAGGAACTGACTAAACTTAACAAGGAAAAGGAAAGTCTTGAAGCAACTGTGGAAGATCTAACCTCTAATGCGAAACAGTTGAAGGAGTTGTGCACTGATTTAGAGGAAAAGCTAAAGCTTTCAGAGGAAAATTTTCAAAAAACAGATTCTCTTTTATCTCAGGCACTTTCAAACAATGCAGAGCTTGAGCAGAAGATAAAGTCTTTGGAAGATCTCTATGATGAATCTGGAGCTGCTGCTAGTCAAAGGAGTCTTGAGCTTGAGGGACATATTCAGGCTTCAAATGCAGCTGCAGAAGAGGTAAAATCACAAATGAGGGAGTTGGAAACACGCTTCATAGAAGCAGAGCAGAGGAATGTGGAACTTAAGCAACAATTAAATTTAGTGCAATTGAAAGCCAATGATGCTGAGAGAGAAGTGACCGAAATCTCTGAGAAAATTACTCATCTCAATGCTAAATTGAAAGAGGCTGAGGAAGAGAAGAATCTTCTTAATGGCCAACTGCAGGAGTACATGGAAAAGGCAATTCAACTTGAATCTGATTTAAATCAATCATCTATGCGGAGTTCACAATTAGAGGAGGAGCTGAAGATAGTCAACGACAAATGTTTTGAGCATGAAGACCGAGCCGTTATGAACCACCAGCGTAGCCGGGAACTAGAAGATTTAATCCAGAGCTCTCATTCAAAATGGGAAGATGCTGCAAAAAAAGTGACGGAGTTGGAGCTGTTACTTGAAACAGAGAAATACAGAATTCAGGAACTTGAACAACAAATAAGCACATTAGAAAAGCGCTGTAGTGATTCAGAAGCACAGGCCAATAAACACGTTGACGAAGTGTCTTATCTGAAACCAGAAATTGAGGCATTGCAAGCTCAAGCCTCAAGCCTTGAAATTACACTGCGAGAAAATAGTGAAAGGGAAAAGGAGTTAGAAGACTCTTTGAGTGCAGTGACAGATGAAAAGAAAAGGTTGGAAGATGCTTCAAACAGCTTGAATGAGAAGCTCGCTGAGGCAGAAAACCTATTGGAAATTGTGACGAATGATTTAAATCTTACACAAGTTAAGTTGCAAAGCACAGAAAGTGATCTCAAGGCTGCTGAATTGAGAGAGAGTGAGTTGATGGATAAACTTAAAGCGTCTGAAGAAAATCTTGTCATACGAGGAAGAGATATAGAGCAGACTGCTACAAGAAACTTAGAACTTCAAATGTTACATGAATCTCTGACGATAGATTCCGAACAGAAACTTCAAGAAGCTATAGAAAAACTCAACAACAAAGATTCTGAGGTTCAATCTATGCTTGAGAAAATTAAGATTTTGGAGGAACACATGGCCGAAGCCAGGGAACAGTCTACATCTTTGAAGAATGAACTCGAAGAAAGTTTGAGCAAAGTGGCTACTTTGCAAAGTGAAAATGAAGATTTAAAAAGGCACATTTTAGAAGCGGAGAACAAGAGTTCTCAGTCTTTTTCAGAGAATGAATTATTGATGGGAACAAACATTCAACTGAAAACCAGGATCGATGAACTACAGGAATCATTGAACTGTTCTCTATCAGAGAAGGAAACCACTGCTCAAGAACTCGTGTCTCATAAGAACACTATAGCTGAATTAAATGATCTTCAATCAAAATCCTCTGAAATTCATCATGCAAATGAAGCTCGGATCCTGGAAGTAGAATCACAATTACAAGAAGCATTGCAGAGGCATACTGAGAAGGAATCAGAAACCCAAGAATTGAATGAGAAGCTGAATACACTTGCGGGCCAAATAAAGGTTTACAAAGAACAGACACGTGAAGCAGTTGCAATTTCTGACACTCATAAAGCTGAGCTGGAGGAGAGTCTCCTAAAATTAAAGCATCTTGAAACGGTTGTTGAGGAGCTGCAAAACAAGTCACGCTACCATGAAAAAGAATCTACTGGACTAAATGAGGAATTAAGTGATTTACAGACAAAGCTCTCTGCAGCACTTGTTGAGAAGGATGAAACGGCCAAAGAGTTACTCACATCCAAGAATGCCATTGAAGAATTAGTTACAAAGCATAGTGCGGAAGCGCAGACATTAAAGTCACAGATATCCTCAGTAATAGATGAGAAGAATTTGCTCGATGAGACTCATCAGAAGTTAAAGAATGAACTTCAGTCTCTGATAATTGACCTTGAAGAGAAGTTAAAGGAACAACAGAGAAACGAAGACTCTCTAAGATCTGAGGTCGAAACTCTCAAAATTGAGATTGCTGATAAATCTGTATTGCAAAGTCGGCTGAAGGAGATTGAAGAGCAACTGATAAAAGCCGAATCGAGACTAAATGAAGAGGTTGGAAGTGTTCAAGCTGCTGCTTCTCAAAGAGAAACAGAATTAAGTTCAAAATTGGAAGAGTATGCACAAAAAGTCAATGACACAAATGTGCTGAATGGAAAGGTAGCAGAACTTGAGAAAGAGTTACAACTTGCACAGGCTACTATCGCTAACCAGAAAGGAGCAGAATCTCAGAAGTTGGAACTAGAAGCAGCCCTCAAGAATTCTCTTGAAGAACTTGAAACAAAGAAAAACGAAATCTCTGTTCTACAGAAGCAAGTAATAGATTTAGAGCAGAAATTGCAACAGGCTGGTGAGAAAATCTCAGTCAAGGGTGAGGAGGGTGTTGATCAGAAAGATGGGTTGGAAGTCAAATCCAGGGATATTGGATCAAGCATCTCAACTCCATCAAAAAGGAAGAGCAAGAAAAGGTTAGAAGGAGCAACTTCTCAAACATCATCTTCTTCCGAGACTCATATTCAAACTGGTCAGGATTCACCTGTCATAAATATCAAGTTTATCTTGGGAGTAGCTATTGTGTCCATTATCGTTGGCATAATTCTTGGGAAGCGTTATTAG 4032 0.3971 MEEETKVISEVPVTKVVEEAVHKDDNIKKTNGDLPQVKGEGKKEEEENAFDGEFIKVEKEENALDDKSHNTERSSDPPSREFLEAQEKIQELEVELQRLADSLKTSEHENAQLKGDISVTKEKLEESEKKYEELELSHKKLQEQIIEDEKKYNLQLGTLEEALKSQEENQKELLHVKEAFDAMNLELESSRKKMQELQQELQLSADEAQKFEELHKQSGSHAESEGKKALEFERLLEEAKLSARGMEEEMTSLKEELKGVYDKIAENQKVEEALKTTAAELSTIQEELTHSKSQLLEVEQRLSSRDFLVDELTQELNLRKTSETQLKEDMSALQNLFASTKEELREKVSELETARLKLQEEEKLRESIEVAFKSQEAQFLSVQEELTKLNKEKESLEATVEDLTSNAKQLKELCTDLEEKLKLSEENFQKTDSLLSQALSNNAELEQKIKSLEDLYDESGAAASQRSLELEGHIQASNAAAEEVKSQMRELETRFIEAEQRNVELKQQLNLVQLKANDAEREVTEISEKITHLNAKLKEAEEEKNLLNGQLQEYMEKAIQLESDLNQSSMRSSQLEEELKIVNDKCFEHEDRAVMNHQRSRELEDLIQSSHSKWEDAAKKVTELELLLETEKYRIQELEQQISTLEKRCSDSEAQANKHVDEVSYLKPEIEALQAQASSLEITLRENSEREKELEDSLSAVTDEKKRLEDASNSLNEKLAEAENLLEIVTNDLNLTQVKLQSTESDLKAAELRESELMDKLKASEENLVIRGRDIEQTATRNLELQMLHESLTIDSEQKLQEAIEKLNNKDSEVQSMLEKIKILEEHMAEAREQSTSLKNELEESLSKVATLQSENEDLKRHILEAENKSSQSFSENELLMGTNIQLKTRIDELQESLNCSLSEKETTAQELVSHKNTIAELNDLQSKSSEIHHANEARILEVESQLQEALQRHTEKESETQELNEKLNTLAGQIKVYKEQTREAVAISDTHKAELEESLLKLKHLETVVEELQNKSRYHEKESTGLNEELSDLQTKLSAALVEKDETAKELLTSKNAIEELVTKHSAEAQTLKSQISSVIDEKNLLDETHQKLKNELQSLIIDLEEKLKEQQRNEDSLRSEVETLKIEIADKSVLQSRLKEIEEQLIKAESRLNEEVGSVQAAASQRETELSSKLEEYAQKVNDTNVLNGKVAELEKELQLAQATIANQKGAESQKLELEAALKNSLEELETKKNEISVLQKQVIDLEQKLQQAGEKISVKGEEGVDQKDGLEVKSRDIGSSISTPSKRKSKKRLEGATSQTSSSSETHIQTGQDSPVINIKFILGVAIVSIIVGIILGKRY* 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00311 1343 Coils Coil 940 981 - -
Rops3g00311 1343 Coils Coil 82 169 - -
Rops3g00311 1343 Coils Coil 1077 1160 - -
Rops3g00311 1343 Coils Coil 229 263 - -
Rops3g00311 1343 Coils Coil 474 592 - -
Rops3g00311 1343 MobiDBLite consensus disorder prediction 1298 1313 - -
Rops3g00311 1343 Coils Coil 267 287 - -
Rops3g00311 1343 SUPERFAMILY Tropomyosin 384 608 - -
Rops3g00311 1343 Coils Coil 996 1051 - -
Rops3g00311 1343 Coils Coil 341 427 - -
Rops3g00311 1343 MobiDBLite consensus disorder prediction 1270 1313 - -
Rops3g00311 1343 Coils Coil 800 869 - -
Rops3g00311 1343 PANTHER EARLY ENDOSOME ANTIGEN 1 1343 - -
Rops3g00311 1343 Coils Coil 1186 1258 - -
Rops3g00311 1343 Coils Coil 670 767 - -
Rops3g00311 1343 MobiDBLite consensus disorder prediction 24 83 - -
Rops3g00311 1343 SUPERFAMILY Tropomyosin 607 847 - -
Rops3g00311 1343 Coils Coil 435 462 - -
Rops3g00311 1343 Coils Coil 180 214 - -
Rops3g00311 1343 Coils Coil 621 662 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00311 - K20283 gmx:100801514 1940.62