Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00309 ATGGTGAGAAAACATGGTTGGCAATTACCTGCTCACACTTTTCAGGTTGTTGCAATCACTGTATTCTGCTTGTTGGTGATTGCTTTCTATGCTTTCCTTGCTCCCTTCGTTGGAGGTCATATATGGGAATACTCCCTCATTGGTGTTTACTCGCCTGTGGCTCTCATTGTTTTCATTCTCTATGTCAGATGTACTGCAATTAACCCTGCAGATCCAGGCATTATGTCTAAATTTGATCCTAGAGTAGGAAATAAGTTCAATTCTGCTCATGATTTATTGGGGAAGCATCAAGCATCTGAACATGATGGCATTGCTGCACGAGAGCATTCTTCTCCATCATCTGTTACTTCCAAAAGGTCTATGACAAATATGAGCAAGAAAAGCTCAGTGGAAGATCTTGACAGAATAGATAATTCTAGGAAACAGAATAACCGAAACTCATGTGATGTAATTGGAGGAATTTTCTGCATATTATTTTCACATGAAGATTGCCGGAAACAAGAAGCAACAGCTGATGAGCAGGGTGGTGGAGAAGATGCTCTGTTCTGCACTTTGTGTAATGCTGAGGTGCGCATGTTCAGTAAACATTGTAGAAGTTGTGATAAATGTGTTGATGGCTTTGATCACCATTGTCGGTGGCTTAACAATTGTGTGGGTCGCAAAAATTACTGTTCTTTTATTGCTCTCATGGCCTTTAGTCTTATATGGCTTGTTATTGAAGCTGGAGTGGGTATTGCTGTTTTAGTGCGTTTCTTTGTTAACAAGAGAGGAATGGAATCCGAAATCATTGATAGACTCGGAAATGGATTCTCTCGTCCCCCGTTTGCAGTTGTTGTGGTCATATGTACTGCAGTTTCTGTCTTGGCTTGTGTGCCTTTGGGTGAGCTTTTCTTTTTCCACATGATACTAATCAGCAAGGGCATCACAACCTATGAATATGTTGTAGCAATGAGAGCCTTGAGTGAAGTACAAGCAGGGGCATCTGTGGATGAGGATTTGCCAAATGAACTTTACTCTCCGACAGGCTCTGCTACGACTGGATTGAGTGGAGGAAGTTCTCTTGGTTTGCAGTATAAAGGGGCATGGTGTACCCCTCCTAGGATATTCGTGGATTATCAGGATGAAGTTGTGCCTCACTTGGAGCCTGGAATGCTGCCATCAACTGTTGATCCAGATGCAGCTGGGATTGCAGAAAGAGGCCAAAATATGCCAAAAAAGTATGTTCGTAGGAGTGCTTGGAAGCTTGCTAAGTTGGATTCACAAGAGGCGATGAAAGCAGCTGCAAAAGCCAGGGCATCTTCTTCAGTTTTGCGACCTGTTGATAACCACCGTCTACCTGATGCGGAATTAAGCTCTAGTGGCAACATGAGCATCAGGAGTAGTTTGAGCACAGAGACTGGAACTAATAAGGAAATAAAATATGAATTGAGATTATCTCCAGTGAGGAATTCTATTGCTCCCAGTCAAGGAAGTCGTGATGAGTATGAAACTGGAACTCAAAGCATGAGTAGTTTCAGTAGTCCAAGCCATATTCAAGAGGCAGTTACACTTAGCCCTCTTCCACAGGGTCACAATTTGGGTGGCTTCAGGGCAGGTACCTCAATTCCTAGTTTGGTGCCTGAACGCCCTTTAACTACAAAAGCAACATTGTCAAACTTCAAGAACCCAATATCCAATCCTTCTCTTGGATTTGATGGAAGAATAATGCCAAAGGGAATAGGTAATGATCAGTCATTACTTTCAGCTTCTGGCACGTCTATTCTAAGAGATGTGAAACGGACATCAGTTGTCTGGGATCAAGAAGCTGGCAGATATGTATCAGTTCCTTTATTGCCCTCAGAAGCTCGAAACAGATCATCCATGCGAATAGAAATGCCAAATTCAAATGCTGAAACAAGAAATATTGGAAGAAAACCAGTGATTCCTCCACAGGAGTCATCATCATCTGCACCCAAGTCTCCAGGGCAGCATGCACAGAATCTGATGTACACCGGAGATTCTATCTTCTTTGGTGGTCCATTTTTGAGTGTCCCTGCCAAGGATGGTTTGAAAAATGAAAGACATTCGGGATCAGCAGAGGCCCAGAATACTATAGCGGTAAACTTGCCACAAGAGCCAAGATATAGAAGGGATTCACAATCAAATCAGCTTCCCGTGTTTGTTCCCGGTGGTTATGAGAATACTCTTCAACCTCGGTCTAACATAGATTAA 2211 0.4274 MVRKHGWQLPAHTFQVVAITVFCLLVIAFYAFLAPFVGGHIWEYSLIGVYSPVALIVFILYVRCTAINPADPGIMSKFDPRVGNKFNSAHDLLGKHQASEHDGIAAREHSSPSSVTSKRSMTNMSKKSSVEDLDRIDNSRKQNNRNSCDVIGGIFCILFSHEDCRKQEATADEQGGGEDALFCTLCNAEVRMFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYCSFIALMAFSLIWLVIEAGVGIAVLVRFFVNKRGMESEIIDRLGNGFSRPPFAVVVVICTAVSVLACVPLGELFFFHMILISKGITTYEYVVAMRALSEVQAGASVDEDLPNELYSPTGSATTGLSGGSSLGLQYKGAWCTPPRIFVDYQDEVVPHLEPGMLPSTVDPDAAGIAERGQNMPKKYVRRSAWKLAKLDSQEAMKAAAKARASSSVLRPVDNHRLPDAELSSSGNMSIRSSLSTETGTNKEIKYELRLSPVRNSIAPSQGSRDEYETGTQSMSSFSSPSHIQEAVTLSPLPQGHNLGGFRAGTSIPSLVPERPLTTKATLSNFKNPISNPSLGFDGRIMPKGIGNDQSLLSASGTSILRDVKRTSVVWDQEAGRYVSVPLLPSEARNRSSMRIEMPNSNAETRNIGRKPVIPPQESSSSAPKSPGQHAQNLMYTGDSIFFGGPFLSVPAKDGLKNERHSGSAEAQNTIAVNLPQEPRYRRDSQSNQLPVFVPGGYENTLQPRSNID* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00309 736 MobiDBLite consensus disorder prediction 619 659 - -
Rops3g00309 736 MobiDBLite consensus disorder prediction 99 136 - -
Rops3g00309 736 MobiDBLite consensus disorder prediction 620 634 - -
Rops3g00309 736 MobiDBLite consensus disorder prediction 448 469 - -
Rops3g00309 736 MobiDBLite consensus disorder prediction 109 127 - -
Rops3g00309 736 MobiDBLite consensus disorder prediction 681 736 - -
Rops3g00309 736 Pfam DHHC palmitoyltransferase 180 315 IPR001594 GO:0016409
Rops3g00309 736 MobiDBLite consensus disorder prediction 641 659 - -
Rops3g00309 736 MobiDBLite consensus disorder prediction 689 736 - -
Rops3g00309 736 MobiDBLite consensus disorder prediction 435 506 - -
Rops3g00309 736 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 22 318 - -
Rops3g00309 736 ProSiteProfiles DHHC domain profile. 181 231 - -
Rops3g00309 736 MobiDBLite consensus disorder prediction 482 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00309 Rops-Chr3 3793512 3801028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00309 182 312 Lipid Metabolism Gene Families AT4G22750 29.771 5.07e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00309 K20027 - gmx:100805779 1284.63