Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00307 ATGGCAACTTCTAATGGCACTTGGTTGACCTTGGCAATCTTAGTGGTTGTTGGATCTTTGATATATAACACAAACGAGGTTTCAGCTCAATGTGGAGGAAGCTTTCCAGACGCTGCATCCCAGTGTTCAAAGTTTGTGGGTAAAAACGGACCAACGATTCCACCATCACCAGGGTGCTGTGCAGTGATTAGAAAATTTGATGTGCCATGCGTATGCAAACTTGTTACTAAAGAGGTTGAAAAGCTTGTGAGTATTCAGAAGGTCATATTTGTTGCACGGTCATGTGGGTTGAACGTTCCAGCTGGAATGCAATGTGGATGTGAGATCTTCTACTCATTTTGA 342 0.4298 MATSNGTWLTLAILVVVGSLIYNTNEVSAQCGGSFPDAASQCSKFVGKNGPTIPPSPGCCAVIRKFDVPCVCKLVTKEVEKLVSIQKVIFVARSCGLNVPAGMQCGCEIFYSF* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00307 113 CDD nsLTP_like 31 100 IPR044741 -
Rops3g00307 113 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 11 106 - -
Rops3g00307 113 Pfam Probable lipid transfer 11 105 IPR016140 -
Rops3g00307 113 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 40 101 IPR036312 -
Rops3g00307 113 Gene3D - 28 105 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00307 Rops-Chr3 3781073 3781414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00307 5 106 Acyl Lipid Metabolism Gene Families AT4G33550 38.679 8.32e-23 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00307 - - cam:101501404 173.326