Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00303 ATGGGGAGAGTGGTTGTTGGAGTGGCGGTGAGTCTGGCGGCGGTGACATGTGTGGTGGCGGCGGCGGTGGTTGGGAGGAGAATGAGGAGTAGGAGGAAGTGGAAGAAGGCGGTTGGAGTGTTGAGGGAAGTGGAGGAAGCGTGTGAGACGAGTGTTGGGAGGTTGAGGCAAGTGGTGGATGCTATGGCTGTTGAGATGCACGCTGGTTTGGCATCAGAAGGTGGTTCCAAACTCAAAATGCTTCTCACTCACGTTCATAATCTCCCTAATGGGACTGAGAAAGGAACATATTATGCACTAGACCTTGGGGTTACAAATTTTCGGATTTTACGGGTTCATTTACGTAATCAACCATCTTCAGTCTTGGAACATGTAGTAGAGCAACGACCCATTCCCCAACATTTAATGACTAGCTCAAGCGAGGATCTTTTTGATTTCATTGCTTCTTCATTAAAGGAATTCGTTGAGAAAGAAGATGGTTCCGAGCTTTCACCGGACAGAAGAAGGGAACTTGGATTTACATTTTCCTTCCCTGTGAAACAAATGTCTGTTTCCTCAGGCATTTTAATAAAAGGGACGAAAGGGTTTTCCATTGTAGATATGGTAGGAATAGATGTTCCTGCATGTTTGCAGGAAGCATTGACACGAAAAGGACTAGACATGCGGGTGGCTGCGTTGGTTAATGATACTGTTGGTACATTAGCTCTCGGACATTATCATGACGCAGATACTGTTGCTGCTATAATACTTGGCACTGGAACTAATGCCTGCTATTTGGAACGGACTGATGCTATTATCAAGTGTCAAGGTCTTCTTACAACATCAGGATGCATGGTTGTGAATATGGAATGGGGAAACTTTTGGTCATCTCACTTACCAAGAACATCGTATGACATCGATTTAGATGCTGAAAGCCCTAATCCTAACGATCAGGGTTTTGAGAAAATGATATCTGGAATGTATCTTGGTGACATCGTGAGGAGAGTCATTCTCAGGATGTCATTGGAGTCGGATGTATTCGGACCTATATCTTCCAAGCTTTCGGTGCCTTTCATACTGAGGACTCCTTTGATGGCTGTCATGCATGAGGATGATTCTCCTGACTTGAGAGAAGTAGCAAGAATCCTTGAAGACATCCTTGAGACACCTGACGTTCCTTTGAAGGTAAGAAAAATTATAGTGAAGGTGTGTGATGTAGTGACTCGTAGAGCTGCTCGATTGGCAGCTGCTGGTATTGTTGGTATCTTGAAGAAGATTGGTAGGGAGGGAAGCGGTGGCATCACAGGTGGACGCAGAAGTGATATGAAAATGAAAAGAACAGTTGTGGCAATTGAAGGAGGTTTATATTCTAGCTATACATTGTTTAGAGAGTACTTGCACGAAGCTTTGAACGAAATATTAGGGGAAGATATTTCCAAGCATGTAATTCTTAGGGTCACTGAAGATGGATCAGGCATTGGAGCAGCACTGCTTGCTGCCTCTCATTCATCCTATAATGTGGATACAGTACAGCAGCTATAG 1521 0.4431 MGRVVVGVAVSLAAVTCVVAAAVVGRRMRSRRKWKKAVGVLREVEEACETSVGRLRQVVDAMAVEMHAGLASEGGSKLKMLLTHVHNLPNGTEKGTYYALDLGVTNFRILRVHLRNQPSSVLEHVVEQRPIPQHLMTSSSEDLFDFIASSLKEFVEKEDGSELSPDRRRELGFTFSFPVKQMSVSSGILIKGTKGFSIVDMVGIDVPACLQEALTRKGLDMRVAALVNDTVGTLALGHYHDADTVAAIILGTGTNACYLERTDAIIKCQGLLTTSGCMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSLESDVFGPISSKLSVPFILRTPLMAVMHEDDSPDLREVARILEDILETPDVPLKVRKIIVKVCDVVTRRAARLAAAGIVGILKKIGREGSGGITGGRRSDMKMKRTVVAIEGGLYSSYTLFREYLHEALNEILGEDISKHVILRVTEDGSGIGAALLAASHSSYNVDTVQQL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00303 506 FunFam Phosphotransferase 83 250 - -
Rops3g00303 506 Pfam Hexokinase 246 493 IPR022673 GO:0005524|GO:0005975|GO:0016773
Rops3g00303 506 Pfam Hexokinase 41 239 IPR022672 GO:0005524|GO:0005975|GO:0016773
Rops3g00303 506 Gene3D - 61 481 - -
Rops3g00303 506 Gene3D - 83 492 - -
Rops3g00303 506 PRINTS Hexokinase family signature 223 239 - -
Rops3g00303 506 PRINTS Hexokinase family signature 246 260 - -
Rops3g00303 506 PRINTS Hexokinase family signature 98 114 - -
Rops3g00303 506 PRINTS Hexokinase family signature 171 196 - -
Rops3g00303 506 PRINTS Hexokinase family signature 311 333 - -
Rops3g00303 506 PRINTS Hexokinase family signature 393 415 - -
Rops3g00303 506 ProSiteProfiles Hexokinase domain profile. 35 493 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Rops3g00303 506 PANTHER HEXOKINASE 11 496 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Rops3g00303 506 CDD NBD_sugar-kinase_HSP70_actin 99 260 - -
Rops3g00303 506 SUPERFAMILY Actin-like ATPase domain 243 497 IPR043129 -
Rops3g00303 506 FunFam Phosphotransferase 218 481 - -
Rops3g00303 506 SUPERFAMILY Actin-like ATPase domain 24 241 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00303 Rops-Chr3 3704091 3708457 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00303 K00844 - gmx:100790064 826.624