Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00275 ATGGATAGCCTTCAAGCCACATACAAAGACGAAGAAGACGAAGAAGACGACGCTCCACCCACAACCACCGCCGACGAACCCGCGGTCTCCGCTACCGCCGCAGCCGGAGCAGTAGGAGGTGGTACCGACACCGATTCGATAGACGTTCCTCCCGTCACTACCAGCACCCCTTCCGATACCCCAACCGAAGGCCAAAACGACGGAAGATCGGAACCCGACCCTTCCGACGACGAAGCCGCATGGGGACCGAAGAAGTCTCCAAAACCGGAGAGAGAAGAAGGAGAAGAAGACGAAGAAGAACCACCTCCAAAGAAGCAGAAGCAACTTTCCTCTCTCAGCGGCGTGAAGGAGGAGAATTTGCCTGCGACATTGCCGGAGGAGGGGAAGAACACTCCGGGAAACGTGGCCACGGTTACGGCAACGAATGGGACAGGGACGAATTCGAAGAAGTCGAAGAAGAAGAGCAACAACGTGTGGGTGACGAAATCAACAAGGAAAGGGAAGAAGAAGAGCAAGAACAACAACAACAACAACAACAACAACAACCACACTAATGGAGAAGAGAGTGTTCTGATAACCCCAGTTCCAAGATTCCCCGACAAGAATGACGACACGCCGGAGATGAAGATATGCTTATCGAAGGTTTACAAAGCGGAGAAGGTTGAGTTGAGTGATGATAGAATGAGTGCAGGGAGCACAAAGGGTTATAGAATGGTGAGGTCAACGAGAGGGGTTGTGGAAGGTGCTTGGTACTTTGAGATTAAGGTTGTGAAGTTGGGGGAAACTGGGCATACTCGTTTGGGTTGGTCAACTGAGAAGGGTGATTTGCAGGCACCTGTTGGTTATGATGGGAATAGTTTTGGGTATAGGGATATTGATGGTAGTAAGATACATAAGGCTTTGAGGGAAAAGTATGGAGAGGAAGGGTACAAAGAAGGTGATGTTATTGGCTTCTATATTAATTTGCCTGATGGAGACAAGTATGCACCTAACACATCCCAATTGGTTTGGTATAAAGGCCAACGATATGTTTGTGCCCAAGATGCTAAGGAAGATCCTCCCAAAGTAGTGCCTGGAAGCGAGATATCTTTCTTTAAAAATGGCGTATGCCAAGGTGTTGCATTCAAGGATCTTTATGGTGGTCGTTACTATCCTTCGGCTTCAATGTTTACTCTCCCCAATGAACCAAACTGCACGGTCAAGTTCAACTTTGGTCCTGACTTTGAATTCTTTCCTGAGGATTTCAATGAACGACCAATTCCCAGGCCAATGATTGAAGTTCCTTATCACGGTTTTGACAATCGAGTTGAAAATGGAGAGTCTAATGAGAAGAAAGAGTGA 1341 0.478 MDSLQATYKDEEDEEDDAPPTTTADEPAVSATAAAGAVGGGTDTDSIDVPPVTTSTPSDTPTEGQNDGRSEPDPSDDEAAWGPKKSPKPEREEGEEDEEEPPPKKQKQLSSLSGVKEENLPATLPEEGKNTPGNVATVTATNGTGTNSKKSKKKSNNVWVTKSTRKGKKKSKNNNNNNNNNNHTNGEESVLITPVPRFPDKNDDTPEMKICLSKVYKAEKVELSDDRMSAGSTKGYRMVRSTRGVVEGAWYFEIKVVKLGETGHTRLGWSTEKGDLQAPVGYDGNSFGYRDIDGSKIHKALREKYGEEGYKEGDVIGFYINLPDGDKYAPNTSQLVWYKGQRYVCAQDAKEDPPKVVPGSEISFFKNGVCQGVAFKDLYGGRYYPSASMFTLPNEPNCTVKFNFGPDFEFFPEDFNERPIPRPMIEVPYHGFDNRVENGESNEKKE* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00275 446 ProSiteProfiles B30.2/SPRY domain profile. 190 409 IPR001870 -
Rops3g00275 446 Gene3D - 208 422 IPR043136 -
Rops3g00275 446 FunFam Protein TRAUCO 209 422 - -
Rops3g00275 446 MobiDBLite consensus disorder prediction 69 105 - -
Rops3g00275 446 SMART SPRY_3 247 408 IPR003877 GO:0005515
Rops3g00275 446 CDD SPRY_Ash2 221 408 - -
Rops3g00275 446 MobiDBLite consensus disorder prediction 173 189 - -
Rops3g00275 446 MobiDBLite consensus disorder prediction 7 21 - -
Rops3g00275 446 Pfam SPRY domain 250 325 IPR003877 GO:0005515
Rops3g00275 446 MobiDBLite consensus disorder prediction 47 68 - -
Rops3g00275 446 SUPERFAMILY Concanavalin A-like lectins/glucanases 208 412 IPR013320 -
Rops3g00275 446 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 30 438 IPR037353 GO:0048188|GO:0051568
Rops3g00275 446 MobiDBLite consensus disorder prediction 130 162 - -
Rops3g00275 446 MobiDBLite consensus disorder prediction 1 190 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00275 K14964 - gmx:100816796 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00275 3 3391085 3396290 Rops3g00275 3 3391085 3396290 ECH