Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00273 ATGGCCCCTCCTAACAAGCTCAATTCTCCGGAAAATACAAGTATGTCATGTTCGCAGGCTGAGAATGGTTTTATCAGTTCCTTTTCTCTCTTCTCTGAGAAGGCAGTGCAGGAACTTCTTCAATCTCCAGTCCAAGGGTCGGATGACCATCTTATAGAGTTCTCTGAAGCTTTAAGAACCGTCGCGAAGGCCCTCAGACGAGTTGCTGAAGGAAAAGCATCTGCTCAAGCTGAGGCTGCTGAATGGAAACGAAAATATGAGTTGGAGAAGGCACGAAATCTACAGTTTGAAGGCAAAGAGAAATCATGCCAAGAGAATCAGGCTAATCTTGATGTTGTGAGGACAAATCACCCTTCCAAACAACCTGCATCACATGATGAAGCTAATTGGCAGTCTGAAAAATGTTGTTCAAGAAATGGTATTTGTTCCCATGAGGTTCTTAGGGATGGGAAACCCAATTCTGATTCCAAGATGGTCAGAAAGGCTTCATTTAAACTTCAATGGTGCTGCAAAGGTGAGCAAAGTGAACAACACAAACATGACATTGTCTCTTTTGAAAGAGGAAATATAACCACGGCAGCACGCAGTAGTAAGCAGATCTCTTTGAAGTGGGAATCAAGCCCGCAGACGGTGCTCATATTGACCAAACCTAATTCAGTTTCAGTTCAAATTCTCTGTGCTGAAATGATTAGATGGTTGAGGCTGCAAAAGAAACTACATATCTATGTGGAACCACGTGTCAGGGTGGACCTTTTGACAGAGTCATCATACTTTAACTTTGTAGAAACTTGGAATGACGATAAGGAAATTTCGATGCTGCACACTAAAGTTGACCTTGTGATAACTCTTGGTGGAGATGGCACTGTCCTATGGGCAGCGTCTATGTTCAAAGGGCCGGTGCCTCCTATTGTCCCATTTTCTTTAGGGTCTCTTGGGTTTATGACCCCTTTCTATTGTGAACATTACAAAGAATGCCTTGAATCAATTTTGAAGGGTCCCATTAGTATCACATTACGGCATCGTTTGCTATGCCATGTTATACGAGATGCAGCTAAAAATGAATTTGAAACTGGAGAACCAATACTTGTTCTAAATGAGGTTACTATTGATCGTGGAATATCATCTTTCCTCACAAATTTGGAATGCTATTGTGACAACTCCTTTGTCACATGTGTGCAAGGGGATGGACTAATCTTATCTACAACTTCTGGCAGTACTGCATATTCTTTGGCAGCTGGAGGATCGATGGTTCATCCTCAGGTTCCAGGTATTCTGTTTACCCCAATTTGCCCTCATTCCCTATCTTTTAGGCCATTGATATTACCAGAGCATGTCACATTGCGGGTGCAAGTACCATTCAATAGCAGAAGCCCTGCATGGGCATCATTTGATGGCAAGGACAGGAAGCAATTAGCCCCAGGAGATGCATTAGTGTGCAGCATGGCACCTTGGCCTGTTCCTACAGCATGTCTGGTTGAATCTACTAATGACTTCTTGCGCAGTATTCATGAGGGTCTCCATTGGAATTTGAGAAAGACACAGTCATTTGATGGCCCCCGGGAAACATGA 1569 0.4321 MAPPNKLNSPENTSMSCSQAENGFISSFSLFSEKAVQELLQSPVQGSDDHLIEFSEALRTVAKALRRVAEGKASAQAEAAEWKRKYELEKARNLQFEGKEKSCQENQANLDVVRTNHPSKQPASHDEANWQSEKCCSRNGICSHEVLRDGKPNSDSKMVRKASFKLQWCCKGEQSEQHKHDIVSFERGNITTAARSSKQISLKWESSPQTVLILTKPNSVSVQILCAEMIRWLRLQKKLHIYVEPRVRVDLLTESSYFNFVETWNDDKEISMLHTKVDLVITLGGDGTVLWAASMFKGPVPPIVPFSLGSLGFMTPFYCEHYKECLESILKGPISITLRHRLLCHVIRDAAKNEFETGEPILVLNEVTIDRGISSFLTNLECYCDNSFVTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEHVTLRVQVPFNSRSPAWASFDGKDRKQLAPGDALVCSMAPWPVPTACLVESTNDFLRSIHEGLHWNLRKTQSFDGPRET* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00273 522 FunFam Probable NAD kinase 1 199 361 - -
Rops3g00273 522 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 210 514 IPR016064 -
Rops3g00273 522 Pfam ATP-NAD kinase N-terminal domain 211 332 IPR002504 GO:0003951|GO:0006741
Rops3g00273 522 FunFam probable NAD kinase 1 341 484 - -
Rops3g00273 522 PANTHER NAD KINASE 55 515 - -
Rops3g00273 522 Pfam ATP-NAD kinase C-terminal domain 364 481 - -
Rops3g00273 522 Coils Coil 72 92 - -
Rops3g00273 522 Hamap NAD kinase [nadK]. 209 508 IPR002504 GO:0003951|GO:0006741
Rops3g00273 522 Gene3D - 198 509 IPR017438 -
Rops3g00273 522 Gene3D - 341 484 IPR017437 GO:0003951|GO:0019674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00273 Rops-Chr3 3362705 3370489 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00273 K00858 - gmx:100806276 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00273 3 3362705 3370489 Rops3g00273 3 3362705 3370489 ECH