Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00272 ATGTCGATCGCGTTTTCCTTCATCACTCCTCCTCCTCCTTCTTCCCATTCTTCATCTAAACCTATTCCTTCCTCTTCTTTCTCTTCACCTTCCATTACTCTCACTCTTCGCCTCACTCCTACTCCTACTCCTACTCCTACTCCCGCTCCTTCCTTCCGCATCCGCCGCCACACAGATCTCCCTTTCCTTCTCCGCTGCAACGGCGGCGGCGGAGGAGTAGGAGGAGGAGGGGGATCCTTCGGAGGTCATGGAGGAGGCGGCGGCGATGAACACGGCAATGAGGGAAAGAAGGAGGCGATGATGGTGTTGGCGGAGGCAGGGAGGTCGTTGGAGAGTTTGCCGGCTGACTTGGCGGCTGCCATAAAGGAAGGGAAGATTCCTGCTGCCGTGGTGTCTCGGTTTCTGGAGCTTGAGAAGTCTGCGTTCTTGCGTTGGTTGCTTCAGTTCTCAGGCTTCAAGGAGCGTCTTCTCGCCGATGATCTCTTCCTTGCCAAGGTTGCCATGGAATGCGGTGTTGGCATCTTCACCAAGACTGCTGCTGAGTATGACCGCAGGAGAGAAAACTTTTTCAACGAGCTCGAAATTGTTTTCGCTGATGTGGTCATGGCCATCATTGCAGATTTTATGCTGGTTTATCTTCCTGCACCTACTGTTTCTCTCAGAGCACCACTTGCAGTCAGTGCCGGGCCTATTGCTAAGTTTTTCCACAACTGTCCAGATAATGCATTTCAGGTTGCTCTGTCTGGAACACCATATTCCTTATTACAGAGGATTGGTGCAATTGTGCGTAACGGGACAAAACTTTTTGCAGTTGGAACTGCTTCATCACTGGTAGGGACAGCTGTGACGAATGCCTTAATTAATGCAAAGAAGGCTGTTGATAAGTCTTCTGCTGGGGAAATTGAAAATGTTCCCATATTGTCTACCAGTGCTGCCTATGGTGTCTATATGGCAGTTTCTAGCAACCTCAGGTATCAAGTTCTTGCTGGAATCATTGAACAGAGGATTTTGGAACCCTTGCTGCACCAGCACAAGCTTTTCCTTAGTGCAATGTGCTTTGCTGTTCGGACCGGCAATACATATTTGGGTTCATTACTGTGGGTGGATTATGCTCGTTGGATAGGGGTTCAGTAG 1134 0.4982 MSIAFSFITPPPPSSHSSSKPIPSSSFSSPSITLTLRLTPTPTPTPTPAPSFRIRRHTDLPFLLRCNGGGGGVGGGGGSFGGHGGGGGDEHGNEGKKEAMMVLAEAGRSLESLPADLAAAIKEGKIPAAVVSRFLELEKSAFLRWLLQFSGFKERLLADDLFLAKVAMECGVGIFTKTAAEYDRRRENFFNELEIVFADVVMAIIADFMLVYLPAPTVSLRAPLAVSAGPIAKFFHNCPDNAFQVALSGTPYSLLQRIGAIVRNGTKLFAVGTASSLVGTAVTNALINAKKAVDKSSAGEIENVPILSTSAAYGVYMAVSSNLRYQVLAGIIEQRILEPLLHQHKLFLSAMCFAVRTGNTYLGSLLWVDYARWIGVQ* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00272 377 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 68 377 - -
Rops3g00272 377 MobiDBLite consensus disorder prediction 1 52 - -
Rops3g00272 377 Pfam Protein RETICULATA-related 154 331 IPR021825 -
Rops3g00272 377 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00272 Rops-Chr3 3356949 3361283 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00272 - - gmx:100811998 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00272 3 3356949 3361283 Rops3g00272 3 3356949 3361283 ECH