Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00268 ATGAGCAGTGGGGAAGGAAAAGTGGTGTGTGTGACAGGTGCTTCTGGTTATATTGCTTCATGGATTGTTAAGTACCTCCTTCAACATGGTTACACTGTCAGAGCCACTGTTCGTGACCCAAGTAATCCCAAAAAGGTTGACCACTTGCTTGAACTTGATGGTGCTAAGGAGAGGTTGCAACTCTTTAAGGCTGATCTTCTGGAAGAAGGTTCCTTTGACTCTGCTATTGAGGGCTGTGATGGTGTCTTCCATACTGCTTCACCTGTTCGTTTTGTTGTCAATGATCCACAGGTTGAATTGCTTGATCCAGCAGTGAAGGGAACTCTTAATGTTCTTAAATCATGTGTAAAATCACCATCTGTGAAACGAGTTGTCTTAACTTCTTCTATTTCTGCAGTTGCATTTAGTGAAAGGCCTAAAAATCCTAAAGTAGTAGTTGACGAGACATGGTTTTCCAATCCAGATTTCTGTAGGGATTCAAAGTTGTGGTACACACTTTCAAAGGTTTTGGCTGAGGATGCTGCCTGGAAATTTGTAAATGAAAAAGGCATTGACATGGTTGTTATTAACCCAACAATGGTGGCAGGACCTCTCTTACAACCAGAGGTTAATGAAAGTGTGGAGCCAATTTTAAACATAATAAATGGTTTACCATTTCAAAATAAATCTATGGGATGGGTCCATGTGAAAGATGTTGCTCATGCCCATATTCAGGCATTTGAGATTGCTTCAGCTAGTGGAAGATATTGTTTGGCTGAGAGAGTGGTGCATTACTCTGAACTTGCTAGGATTTTACATGATCTTTACCCAACCTTGCCAATTTCACATAAGTGTGAGAATGAGGGGCCATATCAACCAACATATCAGATTTCTAAGCAAAAGGCTAAGAGCTTAGGAATTGAGTTTATTCCTTTGGAAGTGACCCTCAAGGAGACTGTAGAAAGTTTCAGAGAAAATAAGATCGTTAGCTTTTAA 975 0.4031 MSSGEGKVVCVTGASGYIASWIVKYLLQHGYTVRATVRDPSNPKKVDHLLELDGAKERLQLFKADLLEEGSFDSAIEGCDGVFHTASPVRFVVNDPQVELLDPAVKGTLNVLKSCVKSPSVKRVVLTSSISAVAFSERPKNPKVVVDETWFSNPDFCRDSKLWYTLSKVLAEDAAWKFVNEKGIDMVVINPTMVAGPLLQPEVNESVEPILNIINGLPFQNKSMGWVHVKDVAHAHIQAFEIASASGRYCLAERVVHYSELARILHDLYPTLPISHKCENEGPYQPTYQISKQKAKSLGIEFIPLEVTLKETVESFRENKIVSF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00268 324 Pfam NAD dependent epimerase/dehydratase family 9 241 IPR001509 -
Rops3g00268 324 CDD FR_SDR_e 9 299 - -
Rops3g00268 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 318 IPR036291 -
Rops3g00268 324 Gene3D - 7 324 - -
Rops3g00268 324 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 313 - -
Rops3g00268 324 FunFam Dihydroflavonol reductase 6 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00268 Rops-Chr3 3256752 3260359 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00268 2 324 Miscellaneous Gene Families AT5G19440 66.975 3.15e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00268 - - gmx:100799213 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00268 3 3256752 3260359 Rops3g00268 3 3256752 3260359 ECH