Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00263 ATGAGCAGTGGGGAAGGAAAGGTGGTGTGTGTGACAGGTGCTTCTGGTTATATTGCTTCATGGATTGTTAAGTACCTCCTTCAACATGGTTACACTGTCAGAGCCACTGTTCGTGACCCAAGTAATCCCAAAAAGGTTGACCACTTGCTTGAACTTGATGGTGCTAAGGAGAGGTTGCAACTCTTTAAGGCTGATCTTCTGGAAGAAGATTCCTTTGACTCTGCTATTGAGGGCTGTGATGGTGTCTTCCATACTGCTTCACCTGTTCGTTTTGTTGTCAATGATCCACAGGTTGAATTGCTTGATCCAGCAGTGAAGGGAACTCTTAATGTTCTTAAATCATGTGTAAAATCACCATCTGTAAAACGAGTTGTCTTAACTTCTTCTGTTGCTGCAGTTGCATCTAGTGAAAGGCCTAAATATCCTGAAGTAGTAGTTGACGAGACCTGGTTTTCGAATCCAGATTTCTGTAGGGAATCAAAGTCGTGGTACACACTTTCAAAGACTTTGGCTGAGGATGCTGCCTGGAAATTTGTAAATGAAAAAGGCATTGACATGGTTGTTATTAACCCAACAATGGTGGCAGGACCTCTCTTACAACCAGAGGTTAATGAAAGTGTGGAGCTAATTTTAAACATAATAAATGGTTTACCATTTCAAAATAAATCTATGGGATGGGTCCATGTGAAAGATGTTGCTCATGCCCATATGAGATTGCTTCAGCTAGTGGAAGATATTGTTTGGCTGAGAGAGTGGTGCATTACTCTGAACTTGCTAGGATTTTACATGATCTGTACCCAACCTTGCCAATTTCACATAAGTGTGAGGATGATGGGCCGTATCGGCCAACATATCAGATTTCCAAGGAAAAGGCTAAGAGCTTAG 885 0.4181 MSSGEGKVVCVTGASGYIASWIVKYLLQHGYTVRATVRDPSNPKKVDHLLELDGAKERLQLFKADLLEEDSFDSAIEGCDGVFHTASPVRFVVNDPQVELLDPAVKGTLNVLKSCVKSPSVKRVVLTSSVAAVASSERPKYPEVVVDETWFSNPDFCRESKSWYTLSKTLAEDAAWKFVNEKGIDMVVINPTMVAGPLLQPEVNESVELILNIINGLPFQNKSMGWVHVKDVAHAHMRLLQLVEDIVWLREWCITLNLLGFYMICTQPCQFHISVRMMGRIGQHIRFPRKRLRA* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00263 294 Pfam NAD dependent epimerase/dehydratase family 9 244 IPR001509 -
Rops3g00263 294 CDD FR_SDR_e 9 240 - -
Rops3g00263 294 FunFam Dihydroflavonol reductase 6 245 - -
Rops3g00263 294 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 241 - -
Rops3g00263 294 Gene3D - 7 256 - -
Rops3g00263 294 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 243 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00263 Rops-Chr3 3231966 3238738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00263 2 242 Miscellaneous Gene Families AT5G19440 68.182 1.83e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00263 - - gmx:100799213 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00263 3 3231966 3238738 Rops3g00263 3 3231966 3238738 ECH