Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00260 ATGTCCACAGTATCAAGAAGACCCAAATGGCAACACCACCATCCTCCTCCTCCAACACCTGTGATCCTGCACTTCCCTCGCCGGAGACCCGTAGCCGGCGGTCACCGGAGGAGGGACCTTAAAGGCAACAAGTTGGGGACTTTGTTTGATCAAGAGAAACGGGTATCTGCTCCGTTGGACCATGGTGGTGGGGAGTGTGAGGGAAGGAGGAGGGAGAGAGTTGAAAGCAGTGAGAGTGGTGGGTCGGCGTTGGAAGAAGAAAAATGGAAGTTTCAGGCTGAAATGTTGAGAGCAGAGTGTAATCTTTTAAGGATGGAGAAGGAGATTGCGTTGAAGAAGTTAGAGAGGACTCGTACAAAGATGGAGAGAATTCTACGATCCGCACTTCATACTCTTGTTTCTGGAAGAATAAAGATTTGTGAAGGAAAGAATATTGATATGGTTTTGGATGAAGAGATACATGAGTTGACAGAGAAACTTGAGAAATTGCAGAAGAGATCGGCACTTAAGGATTTAGAGGCCAAGAATAGCAGAAATTTTGACAAAAAAGTTTGTGTTCTTCAGAGACGACTTGAGAAGATTGGAGGACCATCAGATGAGAAGATATATTTGAGGGAGTTTGAAGAGATGGAAAATGTGAGCTTGTCAATTAAAACAAGTAGCAGACTTGATGACAGCATTGTTTCAAGTGGAAAGCTAAATGTGGAGATTCTAAGAAGGAAAATGGAGGGGTTGTCAAAGGGGATATTATTACAGAGAATGGAGGAAGAGTATAATTCACTGCTGTCCACTGCTAGTAGTTCTCGTGCAAATTCTGGTTCAACTTCCAAGAGAATTGAATTTCAAGATTCATCTTCTTCCATACGAGTACCTCATCAGGAAAAGTTGTCTTGTGAAGGGAACCTGTGTTCAGGGCACTGCAAGACTATTGTAAGAAGAATTGTAGAGCAAGTTAGAATTGAGACTGAGCAATGGTCCCAAATGCAGGAGATGCTTGGTCAGGTGAGGGAAGAGATGGAGGAATTGCAGGCTTCACGAGATTATTGGGAAGATCAGGCCCTGCATTCTGATTTTCAAATTCAATCCCTACACAATGCTGTGCAAGAATGGAAACAAAGAGCTCTTTCATCTGAAAGTAAAACAAATGAGCTCGAAACAAAACTCTCCATGATCTATGGTGATCTTGAAAGGTTGAAGAAGGAACAAAAAGCAGTTCAAGGGACCAAATGTTCACCAATTCCGTTGGACACACATAATGAGTTGGAGAAGCGAATAGTGGTTTGTTGCTCAAAGGAAAAAAGTAATGTTACAGAAAATAACAAGCATAATGAGGTCTTAACTGCTAGAGGTGGATTCCTAGCCCCTAAAAGATCACCATTCCGAGACATTGGGAATTCACCATTGTTGATGAAGCAGAATGGCAAAGCAGTTTTCCCTTTGCATTGCCATCGTTCTTCAAAAGTTGAGAACACTTACTAG 1479 0.4246 MSTVSRRPKWQHHHPPPPTPVILHFPRRRPVAGGHRRRDLKGNKLGTLFDQEKRVSAPLDHGGGECEGRRRERVESSESGGSALEEEKWKFQAEMLRAECNLLRMEKEIALKKLERTRTKMERILRSALHTLVSGRIKICEGKNIDMVLDEEIHELTEKLEKLQKRSALKDLEAKNSRNFDKKVCVLQRRLEKIGGPSDEKIYLREFEEMENVSLSIKTSSRLDDSIVSSGKLNVEILRRKMEGLSKGILLQRMEEEYNSLLSTASSSRANSGSTSKRIEFQDSSSSIRVPHQEKLSCEGNLCSGHCKTIVRRIVEQVRIETEQWSQMQEMLGQVREEMEELQASRDYWEDQALHSDFQIQSLHNAVQEWKQRALSSESKTNELETKLSMIYGDLERLKKEQKAVQGTKCSPIPLDTHNELEKRIVVCCSKEKSNVTENNKHNEVLTARGGFLAPKRSPFRDIGNSPLLMKQNGKAVFPLHCHRSSKVENTY* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00260 492 Coils Coil 332 352 - -
Rops3g00260 492 Coils Coil 104 131 - -
Rops3g00260 492 Coils Coil 146 173 - -
Rops3g00260 492 Coils Coil 251 271 - -
Rops3g00260 492 PANTHER MYOSIN-LIKE PROTEIN 2 476 - -
Rops3g00260 492 MobiDBLite consensus disorder prediction 263 284 - -
Rops3g00260 492 SUPERFAMILY Tropomyosin 322 406 - -
Rops3g00260 492 MobiDBLite consensus disorder prediction 51 84 - -
Rops3g00260 492 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00260 - - gmx:100795130 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00260 3 3212939 3215729 Rops3g00260 3 3212939 3215729 ECH