Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00255 ATGGATTGCGGCGTCGGATCCATCGTATGGGTTCGACGGAGAAACGGGTCATGGTGGCCGGGTCAAATACTTGGCCCCGATGACCTCTCCGCTTCTCATCTCACCTCTCCTCGTTCTGGAACTCCCGTCAAGCTTCTCGGCAGAGAAGATGCCAGCGTGGATTGGTACAATTTGGAGAAATCCAAGCGTGTTAAGGCATTCCGATGTGGTGAGTTTGATGATTGTATTGAAAGGGCTGAATCTGCCCAAGGGGTGCCATTGAAGAAAAGAGAGAAATATGCCCGCCGAGAAGATGCCATTCTTCATGCTCTTGAACTTGAGAGGCAATTGTCGAAGAAGCAAGCTAAATTAGGTGCTGCTTCTGATCGAATCAATTGTAGATCATCTAATGCTGTTAAGAAGGGTGTAGCTTCGTTGCAGCCTGGAATACTGGGAAATGATAATGAAAAACTTGCGAATCCAAAATTGTACATGAGTCGTGAAAATGATATTGCTGAAGGTCCTTTTCCTTCAGACGGCAGTCAGTTGAGTGGGGAAGTGGATCTCCCTGAAGCAACACCTCGGTTGAGAGGCTTGCAGGATTTTGGGCTCAGAATTGCCCCCTTCAAAGGGAAGCTTTCATCTTCTGTTGATCCGAACATGTCTCACAAACTTACAGTTGATGAGGGTGCTCGGGCTCTTGCAAGTGGCATGGGAAGTGCACTTCACACGAATGGAGCTGGACAAATAGCTCGCCGAGCAAAGAGGAGCAAATGTGTGTATTTTCCAGCTGAGTCTAGTGATTCTCTTGATTACAAACAGACTCTAGCCCATGCTGAGATGTCATCTCCCCAACTTGGAGGGGAGTTTCCTTATCGTGGTTCTTTGGTTGGAGAGACTGAATCAACTTTTATGGATGACGTTGAATCTGATTCTTCAGAAACAGGTTCTACTGATTCTGATTTAGATTCATCTGAGACAGAACCAGACATGGATGAAGAGATGACTTTACTTACAGAAACTGGTCGGGATGCTGAAGAACATGAAAGCACTAGCAGTGAGGAGTCTGATGAATTAGCAATTACCAGCAACATGCCTCATCTCTATCCTCGTGAACTGATAACATGTAATGAAGCTGTGTCTAAATGGAAACTAAAAGGGAAAAGGAATGATAGGAATCTTGTGAAGAGGTCTTTTGGTGCTCCTGATGGAAAGGGTATTATATACAGAGCAGAAGCAGATTTGGAAGGAAGAAGAAGTCATTTAAGTCACAAGAGAATGGGTCCGAGTTTGCATTGCTACAGAAATGATTTTAGTGATGCACTTGATGACGATGATGAGATGTTTGGATTGGAAGATGAGTATTCCCCAACTTCCAGAGCTGTATCAAAAAGTCGAAATAAAAGTCATCGTGGTGTTGATTGGAATGATTGGGCCTGGGATGATCATCTTCCTTCAAAAGGATATTGGGATATTAAAGGATTTACTCCAATATATGGTGATCATTATCGTTTTGGTGGGAGAATGAGGTCGATGCTGGTTAATGTAGATTTGAAGGTTCAAGCAGGCTATCGAAAAGAGCCTGTACCCATAGTTTCTCTCATGAGTAAATTAGATGGGAGGGCAATCATAGGGCACCCGATCCAGGTTGAAGCCCTTAAGGATGGTACATCAGATGTTCTATTTTCTGCAATTGATGACTTCAGTAATGATGGGATTGATGTCGAAGGAAGTAGTGTGCTTCCACCAGCGTGGAGGACAGCAAGGAGGACAGCAAATTTTCGCGTCCCGCGCACCCATGTGTTGTCATCAAATGGTGCTGAAGTCGCTGCAGAGTTTCCCTCCTTAGATCAAGAACAAAACTTTGAATATAAAAAATTAAATGCAGGAAGCTCCAATCATAAGGCAAGCCTTCAAAAGAAGAGTGGCCTTAAAAGTCATTGGTCTTCAGCTGACAAAAAGTCCTTGAAAAAGGTGTCAAAGAAGTTGAGCTTGTCATCTAACCAGAAAACTAGAACTCTCTCCTCATTATCTACTGAACATAATCTTAGTAGAAAGCCATTACATGATAGCAGTAGTTATCAAACAGATAGATCGATTAAACCAGAAATCTCTGGGCCCACCACAGTAGCTTGCATACCAGTCCAGTTAGTATTTAGTAGATTACTTGAGAAGATTAATAGGCCTCCATTGAAAGCAGTTAGCAACGTTACTTTGCTGAATAATGGTGTGGAGAGAAATTCATAG 2226 0.4326 MDCGVGSIVWVRRRNGSWWPGQILGPDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDCIERAESAQGVPLKKREKYARREDAILHALELERQLSKKQAKLGAASDRINCRSSNAVKKGVASLQPGILGNDNEKLANPKLYMSRENDIAEGPFPSDGSQLSGEVDLPEATPRLRGLQDFGLRIAPFKGKLSSSVDPNMSHKLTVDEGARALASGMGSALHTNGAGQIARRAKRSKCVYFPAESSDSLDYKQTLAHAEMSSPQLGGEFPYRGSLVGETESTFMDDVESDSSETGSTDSDLDSSETEPDMDEEMTLLTETGRDAEEHESTSSEESDELAITSNMPHLYPRELITCNEAVSKWKLKGKRNDRNLVKRSFGAPDGKGIIYRAEADLEGRRSHLSHKRMGPSLHCYRNDFSDALDDDDEMFGLEDEYSPTSRAVSKSRNKSHRGVDWNDWAWDDHLPSKGYWDIKGFTPIYGDHYRFGGRMRSMLVNVDLKVQAGYRKEPVPIVSLMSKLDGRAIIGHPIQVEALKDGTSDVLFSAIDDFSNDGIDVEGSSVLPPAWRTARRTANFRVPRTHVLSSNGAEVAAEFPSLDQEQNFEYKKLNAGSSNHKASLQKKSGLKSHWSSADKKSLKKVSKKLSLSSNQKTRTLSSLSTEHNLSRKPLHDSSSYQTDRSIKPEISGPTTVACIPVQLVFSRLLEKINRPPLKAVSNVTLLNNGVERNS* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00255 741 ProSiteProfiles PWWP domain profile. 5 60 IPR000313 -
Rops3g00255 741 MobiDBLite consensus disorder prediction 626 695 - -
Rops3g00255 741 MobiDBLite consensus disorder prediction 298 325 - -
Rops3g00255 741 Coils Coil 103 123 - -
Rops3g00255 741 PANTHER T17B22.17 PROTEIN-RELATED 2 729 IPR044679 -
Rops3g00255 741 Pfam PWWP domain 6 83 IPR000313 -
Rops3g00255 741 MobiDBLite consensus disorder prediction 654 695 - -
Rops3g00255 741 Gene3D - 1 119 - -
Rops3g00255 741 SUPERFAMILY Tudor/PWWP/MBT 4 108 - -
Rops3g00255 741 CDD PWWP 6 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00255 Rops-Chr3 3121228 3125123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00255 - - aprc:113864977 1140.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00255 3 3121228 3125123 Rops3g00255 3 3121228 3125123 ECH