Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00251 ATGCTTGGGTCCAAGTTTTTTCGCAGAAATTCAAATTCATTCGCTCAATCGTCTTCCCCTCTCCCTCAAATCTTTTCTCTTCCGGCTCCGATCCCTCAATGGCCTCAAGGACAAGGTTTTGCTTCGGGACTTGTAAATCTTGGTGAAATAGAAGTTTCCAAGGTCACTACGTTTGAATTCATTTGGAGTAGCAATGCTATACTAGACACAAAAAAAGCTGTTACATTCCATAAGCCTGTGGGAATACCCGATGGTTTCCACATCCTTGGTCACTATTGTCAACCTAGTGACAAGCCTCTACGGGGTTTTGTGCTTGTTGCTAGGGAAGTGGGAACCAACCACGAAAACTTACCTCCTCTGAGGAATCCCCTTGACTTTAAGTTAGTTAGGAGTCCAAATGCAGGAAGTCAGGATATGTCATGTGTCTGTTGTTACTTTTGGCTACCCCAGCCTCCTGAAGGTTACAAGGCCCTTGGCTACTTGGTTACTAACAAACCTGACAAGCCTGAGCTGAATGAAACGTGTTGTGTTCGTGCTGACCTCACTGACAATTGTGAACCTTATGGCCTGTTACTTGCTGCTGGTTCTAAAATTCCAGAGTTTTCATTTCAAGTATGGAGCTTGAGACCTTGTGACCGTGGCATGCTAGGGAAAGGGGTTTCTGTGGGGACATTTTTCTGCAGTAGTGGTTGGAAAATGGGAGAAGAGCATCCTATTGCATGCTTGAAGAACCTAAATCCTGCGCTACCAGCAATGCCAAATTTGCAACAAATACATGCACTTATTAAGCAATATGGCCCTACTGTTTTCTTTCATCCTGAGGAAACCTACTTGCCATCTTCTGTGGATTGGTTTTTCAACAACGGAGCCCTGTTGTACAGAGAGGGCGTGTCTACTGGAGAGGGAATTGATGCAATTGGCTCAAATTTACCGGGTGGGGGAACAAATGATGGGCAGTTTTGGATAGACTTGCCAAGTGATGATCGAAAGGGTTTTCTCAAACGTGGGGACTTGAACAGTGCAAGGCTCTATGTTCATGTTAAGCCAGCTCTTGGTGGAACTTTTACAGACATTGCAATGTGGGTTTTTTGCCCCTTCAATGGGCCAGGCACTCTGAAAGTTGGAATTAAGAGCATACCTCTGGGCAAGATTGGAGAGCATGTTGGTGACTGGGAGCATTTTACACTTCGTATATGTAATTTCACTGGAGAGCTCTATAGTATATACTTCTCACAGCACAGTGGTGGTGAATGGGTGGGTGTCTGTGATTTGGAATATATTGATGGCAATAAAGCTATTGTTTACTCATCAAAAAATGGACATGCAAGTTACCCTCATCCTGGGACCTATATCCAAGGGTCTTCAAAACTGGGGCTTGGCATTAGGAATGATGCTGCTCGTAGCAATTTGTGTGTGGATTCTAGTACACACTACGAGATTGTTGCAGCTGAGTATCTTGAAAATGTTGTCACTGAGCCTCCATGGTTGCAATTCATGAGACAGTGGGGGCCCAAAATTGTTTATGATTCAAGAACTGAGCTGGATAAGGTTATCAATGCTCTTCCTCGCATGCTTCAATATTCAATAAAGAACTTTTTTAACAAGTTTCCGGTGGAGCTGTATGGTGAGGAAGGTCCTACTGGGCCTAAAGACAAAAATAATTGGATACAGGATGAAAGATGGTGA 1686 0.4389 MLGSKFFRRNSNSFAQSSSPLPQIFSLPAPIPQWPQGQGFASGLVNLGEIEVSKVTTFEFIWSSNAILDTKKAVTFHKPVGIPDGFHILGHYCQPSDKPLRGFVLVAREVGTNHENLPPLRNPLDFKLVRSPNAGSQDMSCVCCYFWLPQPPEGYKALGYLVTNKPDKPELNETCCVRADLTDNCEPYGLLLAAGSKIPEFSFQVWSLRPCDRGMLGKGVSVGTFFCSSGWKMGEEHPIACLKNLNPALPAMPNLQQIHALIKQYGPTVFFHPEETYLPSSVDWFFNNGALLYREGVSTGEGIDAIGSNLPGGGTNDGQFWIDLPSDDRKGFLKRGDLNSARLYVHVKPALGGTFTDIAMWVFCPFNGPGTLKVGIKSIPLGKIGEHVGDWEHFTLRICNFTGELYSIYFSQHSGGEWVGVCDLEYIDGNKAIVYSSKNGHASYPHPGTYIQGSSKLGLGIRNDAARSNLCVDSSTHYEIVAAEYLENVVTEPPWLQFMRQWGPKIVYDSRTELDKVINALPRMLQYSIKNFFNKFPVELYGEEGPTGPKDKNNWIQDERW* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00251 561 PANTHER BNAC01G40110D PROTEIN 2 561 - -
Rops3g00251 561 Pfam Vacuolar protein sorting-associated protein 62 22 559 IPR009291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00251 Rops-Chr3 3105466 3108363 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00251 - - gmx:100793026 911.368