Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00224 ATGGCTTCAAAATCTAGATCAAGTCTATCTGAAAATCCCAACAAAGCATCATTGGCAACACCAAGAGGCAGTAAAATTAGCAAAGTGGTGTCCAAATCAGAATCTGGGTCACCTTCACCTTTGCAAAATTCCCGCCTCTCTGTGGAACGATCACCACGATCTGTGAATTCAAAGCCAACTGTTGAACGGAAATCACCAAGACCCCCTTCCACCCCACCTGAAAAACAACCCCCAAGAGCCACAAAGGGTTCAGAATTACAGAACCAGTTGAATCTTGCTCAAGAAGACCTAAAGAAAGCAAAGGAGCAGCTCCTTCAGGCTGAGAAGGAGAAGCTAAAAGCAATTGATGAGTTGAAGGAAGCCCAGAGAGTGGCTGAGGAAGCAAATGAGAAACTCAGGGAAGCATTGGTGGCTCAAAAGCGGGCTGAAGAAGAATCTGAGATTGAAAAATTCCGAGCTGTTGAATTGGAACAAGCTGGAATTGAGACTGTGCAGAAGAAGGAAGAAGAATGGCAGAAAGAGCTCGAAAGTGTGAAGAACCAGCATGCTTTGGATACAGCTGCTCTTCTCTCAACAACTCAGGAGCTTCAGCAGGTTAAACAAGAACTCGCCATGACTTGTGATGCAAAGAACCAGGCATTGAGTCATGCTGATGATGCAACTAAAATTGCCGAGATTCAAGCACAGAAAGCAGAGGTTTTATCAGCTGAACTGACCCGGTTGAAGGCCTTACTAGATTCAAAACTGGAAACAGAGGCTGGTGAAAATAAGCTTATATTGAAGCTGAAAACAGAGATAGAAGCTCTAAAGCAAGAACTTGAAAGAGCCAGGGGTTATGATGAGAAGTTGACAGAGAAAGAAACTTCTATTGAACAGCTTAATGTGGAGCTTGAAGCTGCAAAGATGGCTGAATCTTATGCACATAGTCTGCTAGAGGAGTGGAAGAAGAAAGTGGAGGAACTAGAAATGAGGGTTGAAGAAGCAAACAAGTTGGAGAGATCTGCATCAGAATCTTTGGAATCTGTAATGAAGCAGCTAGAAGGAAGCAATGATTTGTTGCATGATGCAGAATCTGAAGTTGCTAATCTTAAAGAGAAGGTGGGATTGTTAGAAATGACAATTGGGAGACAAAGAGCAGATCTTGAGGATTCAGAACATCGACTTCTTATGGCTAAGGAAGAAATTCTCGAAAAGTCAAAGAGGGTTGAGTCTCTCAAATCTGAACTTGAGACAGTTAAGGAAGAGAAAGATCAGGCTCTGAACAACGAACAGCTTGCAGCTTCCAGTGTGCAGAACCTATTAGAAGAGAAAAACAAACTTTTCACTGAATTGGAGAATTCTAGGGATGAAGAAGAAAAGAGCAAAAAGGCAATGGAAAGCTTAGCTTCTGCATTACACGAAGTATCTGCAGAAGCCAGGGAAGCCAAAGAAAATCTACTAAACAGCCAAGCTGAAAAGGAAAGCTATGAGACCCAGATTGAAGATTTAAAGTTAGTCTTAAAAGGTACCAATGAAAAATATGAGTCCATGCTTGATGATGCACGGCATGAGATTGACATTCTCATATGTAGTATTGAAACTTCTAAGAATGCCTTTGAGAACTCCAAGGCTGAGTGGGAGCAGAGAGAACTTCATCTAGTTAGCTGCTTAAAGAAAACTGAAGAAGAGAACATGTCCCTGGAGAAAGAAATAAACAGATTGGTTTATTTGCTTAAAGAAACTGAGGAGGAAGCTAGTGCTAAAAGGGAGGATGAAGCTCAGTTGAAGGAAAATCTGAAGGAAGTTGAGGCTGAGGCGATCCACCTGCAGGAAGCTCTCAAGGAAGTAACGGCTGAGAACATTAAATTGAAGGAGAATCTATTGGATAAAGAAAATGAGTTGCAGAGTATTTTCCAAGAAAACGATGAAATCCGATCTAGGGAAGCCGAATCTATTAAGAAGGTGGAGGAGTTATCTAAGTTGCTGGAAGAAGCAACAACCAGAAACCACACCAAGGAAAATGGGGATCTAACGGACAGTGAGAAGGACTATGATTTGCTTCCTAAAGTAGTTGAATTTTCTGAAGAGAATGGGCATGGAGGAGAAGACATTTCAAAGGTAGAGCTTTCAGTCAATCAGGATGGACTCGAACATAGCTTACAAGAAGAAAGTATCTTGAATGACAAGACTGAAAAACTTGAATCTCCAAAACCTGAGGATGTGAATGGAAAATTGAAGGAAGATGAGAGCAAAGAAAAAGATGAGCCGGTGGAAGTTGAATTTAAAATGTGGGAGAGCTGCAAGATAGAGAAAAAGGAGTTCTCACCAGAGAGAGAACCAGAGCCTGAATCATTTGAAGAGGAAACTGACTCAAAGATAGAAGATGGTGAGAGCTTTGATAAGATAAATGGTACCTCTGTAACAGAGAACATTGATGATGGTGAGAACCCACCATCAAAACAACAACAATTGAAGAAGAAGAAGAAGCCTTTGCTTGGCAAGTTCGGGAGCCTGCTCAAGAAAAAAGGTGCTAGCAACCAGAAATAG 2526 0.4157 MASKSRSSLSENPNKASLATPRGSKISKVVSKSESGSPSPLQNSRLSVERSPRSVNSKPTVERKSPRPPSTPPEKQPPRATKGSELQNQLNLAQEDLKKAKEQLLQAEKEKLKAIDELKEAQRVAEEANEKLREALVAQKRAEEESEIEKFRAVELEQAGIETVQKKEEEWQKELESVKNQHALDTAALLSTTQELQQVKQELAMTCDAKNQALSHADDATKIAEIQAQKAEVLSAELTRLKALLDSKLETEAGENKLILKLKTEIEALKQELERARGYDEKLTEKETSIEQLNVELEAAKMAESYAHSLLEEWKKKVEELEMRVEEANKLERSASESLESVMKQLEGSNDLLHDAESEVANLKEKVGLLEMTIGRQRADLEDSEHRLLMAKEEILEKSKRVESLKSELETVKEEKDQALNNEQLAASSVQNLLEEKNKLFTELENSRDEEEKSKKAMESLASALHEVSAEAREAKENLLNSQAEKESYETQIEDLKLVLKGTNEKYESMLDDARHEIDILICSIETSKNAFENSKAEWEQRELHLVSCLKKTEEENMSLEKEINRLVYLLKETEEEASAKREDEAQLKENLKEVEAEAIHLQEALKEVTAENIKLKENLLDKENELQSIFQENDEIRSREAESIKKVEELSKLLEEATTRNHTKENGDLTDSEKDYDLLPKVVEFSEENGHGGEDISKVELSVNQDGLEHSLQEESILNDKTEKLESPKPEDVNGKLKEDESKEKDEPVEVEFKMWESCKIEKKEFSPEREPEPESFEEETDSKIEDGESFDKINGTSVTENIDDGENPPSKQQQLKKKKKPLLGKFGSLLKKKGASNQK* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00224 841 MobiDBLite consensus disorder prediction 686 841 - -
Rops3g00224 841 Coils Coil 550 640 - -
Rops3g00224 841 Coils Coil 430 506 - -
Rops3g00224 841 MobiDBLite consensus disorder prediction 794 811 - -
Rops3g00224 841 MobiDBLite consensus disorder prediction 1 64 - -
Rops3g00224 841 Coils Coil 83 149 - -
Rops3g00224 841 Coils Coil 311 373 - -
Rops3g00224 841 MobiDBLite consensus disorder prediction 714 772 - -
Rops3g00224 841 Coils Coil 259 303 - -
Rops3g00224 841 Coils Coil 388 422 - -
Rops3g00224 841 MobiDBLite consensus disorder prediction 1 97 - -
Rops3g00224 841 Pfam Weak chloroplast movement under blue light 84 618 IPR008545 -
Rops3g00224 841 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 13 835 - -
Rops3g00224 841 Coils Coil 161 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00224 Rops-Chr3 2860003 2864121 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00224 - - gmx:100777446 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00224 3 2860003 2864121 Rops3g00224 3 2860003 2864121 ECH