Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00219 ATGTCTCTGTCTCTGTCTCTTTTTCGTATCTCTTCTTCGCCTCACCTTTCTACCTCCCTTCTCCTTCCAATTCCATCCCTTTCCTCTTACCCTTCTTTTCTATTCCAACTGCCTCGTAAATTACCAAATGGGCACAGTCTCCACTTTGTTTTTTGCCGCTATAGACGCAGAGATGGCTCAGGTTCTGCTTCCATGCGAGGTGGGCACTTCAAAGTCTGTGCCTTTTCCACCCAATATGACAGTGAGAGTGAAGCGGAGCAAGATGAAGATGATGAACAAATGAGGGGTGGTTATGAGGATGAAATAGAGGAAGAAGAGGGGGATATTAGCTCCTTAGTTTTGCCTGAAAGATGGGATGTGTTGGGTCTTGGTCAAGCCATGGTAGACTTCTCTGGCACAGTTGATGATGAGTTCTTGAAGAATTTGGGATTAGAGAAGGGAACACGGAAAGTTGTAAATCATGAGGAAAGAGGTAGAGTTTTGCGGGCTATGGATGGGTGCAGCTATAAAGCTGCGGCTGGTGGATCTCTCTCTAATAGTTTAGTTGCACTGGCAAGGCTTGGAAGTCGCTCTGTTGAAGCTCCTGCCTTAAATGTGGCAATGACTGGCAGTGTTGGGAGTGATCTGTTGGGTGGCTTCTACAGGGAAAAATTACGTCGAGCAAATGTGCAATTTCTTTCTGCACCTATCAAGGATGGGACAACTGGAACAGTTATAGTTCTCACAACTCCAGATGCCCAACGCACAATGCTTGCATATCAGGGCACATCTTCAACTGTTAATTATGACGCTTCCTTGGCTAGTGCAGTTTCCAAGACCAACATACTTGTTGTTGAAGGATATCTGTTTGAACTTCCTGATACTATTAAAACAATAACCAAAGCATGTAAGGAAGCTAGGAGTAATGGTGCCTTGGTGGCAATAACAGCTTCAGATGTCTCCTGCATTGAGAGACATTTTGATAATTTTTGGGAAATTGTTGGGAATTATGCGGATTTAGTCTTTGCAAATGATGATGAGGCAAGAGCTCTTTGTAATTTTGATGCAAAGGAAAGCACTGCTTCAGTTACAAGGTATCTAAGCCAGTTTGTTCCTCTAGTATCCGTTACTGATGGTCCAACAGGGTCATACATAGGTGTAAAAGGTGAAGTTGTATATATCCCTCCTTCTCCATGTGTTCCAATTGATACATGTGGTGCTGGGGATGCATATGCATCTGGCATTCTGTATGGTGTTTTAAGAGGCATATCAGATTTGAGAAGAATAGGTACAATAGCAGCTAAGGTTGCTGCCACTGTTGTTGGGCAACAGGGGACTCGGCTTAGAATTTCAGATGCAGTCAAATTGGCTGAATCTTTTGCATTTCAACTTGATACATCCACCTTTCGATCTGATGTTGGTACTGATCATATTTCCAGCATCTAA 1425 0.4337 MSLSLSLFRISSSPHLSTSLLLPIPSLSSYPSFLFQLPRKLPNGHSLHFVFCRYRRRDGSGSASMRGGHFKVCAFSTQYDSESEAEQDEDDEQMRGGYEDEIEEEEGDISSLVLPERWDVLGLGQAMVDFSGTVDDEFLKNLGLEKGTRKVVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGSRSVEAPALNVAMTGSVGSDLLGGFYREKLRRANVQFLSAPIKDGTTGTVIVLTTPDAQRTMLAYQGTSSTVNYDASLASAVSKTNILVVEGYLFELPDTIKTITKACKEARSNGALVAITASDVSCIERHFDNFWEIVGNYADLVFANDDEARALCNFDAKESTASVTRYLSQFVPLVSVTDGPTGSYIGVKGEVVYIPPSPCVPIDTCGAGDAYASGILYGVLRGISDLRRIGTIAAKVAATVVGQQGTRLRISDAVKLAESFAFQLDTSTFRSDVGTDHISSI* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00219 474 Gene3D - 127 253 - -
Rops3g00219 474 PRINTS Ribokinase signature 169 188 IPR002139 GO:0016301
Rops3g00219 474 PRINTS Ribokinase signature 326 341 IPR002139 GO:0016301
Rops3g00219 474 PRINTS Ribokinase signature 367 378 IPR002139 GO:0016301
Rops3g00219 474 Gene3D - 121 438 IPR029056 -
Rops3g00219 474 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 396 409 IPR002173 GO:0016301
Rops3g00219 474 FunFam Putative sugar kinase slr0537 121 445 - -
Rops3g00219 474 CDD adenosine_kinase 117 442 - -
Rops3g00219 474 MobiDBLite consensus disorder prediction 82 108 - -
Rops3g00219 474 SUPERFAMILY Ribokinase-like 118 441 IPR029056 -
Rops3g00219 474 Pfam pfkB family carbohydrate kinase 169 441 IPR011611 -
Rops3g00219 474 PANTHER SUGAR KINASE 115 450 - -
Rops3g00219 474 MobiDBLite consensus disorder prediction 81 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00219 Rops-Chr3 2800708 2804126 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00219 - - lang:109355577 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00219 3 2800708 2804126 Rops3g00219 3 2800708 2804126 ECH