Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00214 ATGATGATAGAAAGAGAGAGAGAGGAGCAATTATCGGGCACCCGACCCGGACAAGAAAGCTCTCGAACCATTGACTCCAAGATGAATTTTAACAACATGAAGGTCCCAAAGGTTCCTCCTGGTGGTGGTGGAATCTCTGCTTTACTTAAAGTTAGCATTATTGGTGGGCTTGCTGTCTATGGGGCTGCTAACAGCTTGTACAATGTTGACGGAGGTCATCGAGCCATTGTCTTCAACCGTGTAGTTGGTGTTAAAGATAAGGTTTATCCTGAAGGGACTCATATTATGATTCCATGGTTTGAGAGGCCTGTGATCTATGATGTTCGTGCACGACCTCATTTAGTTGAGAGTACTTCAGGAAGCCGTGATCTTCAAATGGTGAAAATTGGACTTAGAGTTCTTACCCGTCCCGTTCCTAGCCAATTACCAACAGTTTATCGAACTCTGGGTGAGAATTATAATGAAAGGGTCTTGCCTTCTATTATACATGAAACTCTGAAAGCTGTGGTTGCACAGTATAATGCCAGTCAGCTGATTACTCAGAGAGAGGCTGTTAGTCGAGAAATAAGGAAGATATTGACTGAAAGGGCCTCCCATTTTAATATTGCATTGGATGATGTGTCAATCACAAGTTTGACGTTCGGGAAGGAATTTACAGCTGCAATTGAAGCCAAGCAGGTTGCTGCCCAAGAAGCTGAGAGAGCTAAATTTGTTGTAGAAAAAGCTGAACAAGACAAAAGAAGTGCTGTTATTAGAGCACAGGGTGAAGCCAAGAGTGCCCAGTTGATTGGTCAAGCTATTGCCAATAATCCTGCATTCATCACCTTAAGGAAAATTGAAGCTGCAAGGGAAATCGCTCAAACAATTTCCAATTCTGCCAACAAGGTTTACTTGAATTCAGATGATCTCTTACTGAATCTTCAGCAGTTAAATTTGGAGCCGAGTGGGAACAGATAG 957 0.4263 MMIEREREEQLSGTRPGQESSRTIDSKMNFNNMKVPKVPPGGGGISALLKVSIIGGLAVYGAANSLYNVDGGHRAIVFNRVVGVKDKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPSQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERASHFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREIAQTISNSANKVYLNSDDLLLNLQQLNLEPSGNR* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00214 318 CDD SPFH_prohibitin 66 260 IPR000163 GO:0016020
Rops3g00214 318 Gene3D Band 7 domain 94 228 IPR036013 -
Rops3g00214 318 SUPERFAMILY Band 7/SPFH domain 97 233 IPR036013 -
Rops3g00214 318 Pfam SPFH domain / Band 7 family 68 243 IPR001107 -
Rops3g00214 318 PRINTS Prohibitin signature 244 260 IPR000163 GO:0016020
Rops3g00214 318 PRINTS Prohibitin signature 109 125 IPR000163 GO:0016020
Rops3g00214 318 PRINTS Prohibitin signature 173 189 IPR000163 GO:0016020
Rops3g00214 318 PRINTS Prohibitin signature 221 244 IPR000163 GO:0016020
Rops3g00214 318 PRINTS Prohibitin signature 127 146 IPR000163 GO:0016020
Rops3g00214 318 PRINTS Prohibitin signature 150 168 IPR000163 GO:0016020
Rops3g00214 318 PRINTS Prohibitin signature 196 215 IPR000163 GO:0016020
Rops3g00214 318 PANTHER PROHIBITIN 28 312 IPR000163 GO:0016020
Rops3g00214 318 SMART PHB_4 65 226 IPR001107 -
Rops3g00214 318 MobiDBLite consensus disorder prediction 1 25 - -
Rops3g00214 318 FunFam Prohibitin 2 94 228 - -
Rops3g00214 318 Coils Coil 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00214 Rops-Chr3 2756070 2767063 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00214 K17081 - gmx:100811958 512.686