Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00191 ATGGCTTCATTCTCATGCACCCACACCTTTCATGCCCAATCACTGCAGCTCCCAGCCAGAGCGTGCAACAGCGTTGCCACTTTCACCAGAAGCCGGGTCGGATCCGGGTCACGGAGCTCCATTCGGGCATCATCGGCAATAACGAGGGAACGTGAGATGGCATTGGAACAGCGAGGAAAAGAGAAGAAGCAACTTCAGTTGGGAATCGCTGAGTTCTACGACGAGTCGTCTGGGATATGGGAAGATATATGGGGCGACCACATGCACCACGGGTTTTACGACCCGGATTCGACCGTTTCTGTTTCGGATCATCGTGTTGCTCAGATCCGAATGATCGAAGAGTCCCTTCGTTTTGCTTCTGTTTCTGAGGACCCAACCAGATGGCCCAAGAGTATAGTTGATGTTGGCTGTGGCATAGGGGGTAGTTCTAGATACTTGGCCAAGAAATTTGGGGCAAAAAGCATAGGCATCACTTTGAGTCCTGTTCAAGCTGAAAGAGCAAATGCTCTTGCTACTGCTCAAGGATTAGCTGACAAGGTTTCCTTTCAGGTTGCTGATGCTCTAGAGCAACCATTCCCTGATGGGCAGTTTGACCTGGTATGGTCCATGGAGAGTGGAGAGCATATGCCTGACAAAGCAAAGTTTGTTGGAGAGTTAGCTCGGGTAGCAGCACCAGGTGGCACCATAATAATAGTAACATGGTGCCACAGGGATCTTAGTCCAAATGAAGAATCCCTACAACCATGGGAGGAGGATCTCTTGAAGAGGATATGTGATGCATATTACCTTCCAGCGTGGTGTTCAACCGCTGATTATGTCAGATTGCTCGAGTCCCAGTCATTTCAGGACATCAAGTCAGCGGATTGGTCTCCCTTTGTTGCTCCATTCTGGCCAGCAGTGATACGGTCAGCATTGACATGGACGGGTCTCACGTCACTCTTGCGCAGTGGACTAAAAACCATAAAAGGTGCTTTTGCAATGCCGTTGATGATAGAAGGATACAAGAAGGATCTAATTAAGTTTGCCATCATAACATGTCGAAAGTCTGAAAAAGTGGAGGCAGAATAA 1068 0.486 MASFSCTHTFHAQSLQLPARACNSVATFTRSRVGSGSRSSIRASSAITREREMALEQRGKEKKQLQLGIAEFYDESSGIWEDIWGDHMHHGFYDPDSTVSVSDHRVAQIRMIEESLRFASVSEDPTRWPKSIVDVGCGIGGSSRYLAKKFGAKSIGITLSPVQAERANALATAQGLADKVSFQVADALEQPFPDGQFDLVWSMESGEHMPDKAKFVGELARVAAPGGTIIIVTWCHRDLSPNEESLQPWEEDLLKRICDAYYLPAWCSTADYVRLLESQSFQDIKSADWSPFVAPFWPAVIRSALTWTGLTSLLRSGLKTIKGAFAMPLMIEGYKKDLIKFAIITCRKSEKVEAE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00191 355 Pfam Methyltransferase domain 133 231 IPR013216 GO:0008168
Rops3g00191 355 CDD AdoMet_MTases 132 234 - -
Rops3g00191 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 68 348 IPR029063 -
Rops3g00191 355 Gene3D Vaccinia Virus protein VP39 74 350 IPR029063 -
Rops3g00191 355 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 56 350 IPR025774 GO:0008168|GO:0032259
Rops3g00191 355 PANTHER METHYLTRANSFERASE 75 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00191 Rops-Chr3 2496880 2499535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00191 130 288 Acyl Lipid Metabolism Gene Families AT3G18000 31.447 6.11e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00191 K05928 - gmx:732543 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00191 3 2496880 2499535 Rops3g00191 3 2496880 2499535 ECH