Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00186 ATGGCAAGGTCATTGGTGGGCTCCACATCCTGCCTTTCTTCTCCATACAACAATGTACTAATCAAATCCCTCCACTTGCCTCCTTCTCTCTCCACCGTCCACGTCAGCTCCTCCGCCGTAGCAATGTCCACCCACCACCAACCACATCCCTCGTTCGAAATCCTCGGAGGCGCACGTGACCGTTTTCTCCCATCTCTCCCTTACTTGTCTCGCCCTTATAACCCTTTCCCCCTCATTGCTTGGAACCGCCACGTGGAAACCATCTTCGCCGCGTTTTTCCGATCAAACCCCGACGTCAGGCTCCGCCGTGAGTGCCTCCGGACACAAGATGGCGGAGCCGTCGCACTCGACTGGGTTTCCGGCGACGACCGGCGTTTGGCGCCTGATTCTCCACTCCTCATTTTGCTGCCAGGTTTAACTGGAGGTAGTGAGGATTCTTATGTGAGACATATGTTAGTTAGAGCTCAAAGTAAAGGTTGGCGTGTTGTGGTTTTCAATAGTCGTGGTTGTGGAGATAGCCCTGTTACTACTCCTCAGTTCTATTCAGCTTCGTTTTTAGGAGATATGCGTGAGGTTGTTTCCCATGTCTCTTCTAGATACCCTGATGCTAATTTATATGCCGTTGGTTGGTCACTTGGGGCAAACATTCTTGTTCGTTACTTGGGTCAGGAATCCCACAGTTGTCCTCTTTCTGGTGCTGTATCATTGTGTAATCCTTTCAATTTGGTTGTGGCAGATGAGGACTTCCGAAAGGGTTTTAACAATATTTATGACAAGGCTCTTTCAAAGGCACTCTGCAAGATTTTCAAGAAGCATGCTTTACTATTTGAAGATATTGGAGGTGAATACAACATTCCACTGGCAGCCAATGCCAAGACTGTTAGGGAGTTTGACGATGGACTGACACGTGTTTCTTTTGGATTCAAATCCGTGGATGAATACTACTCTACTTCAAGCAGTTTAGACTCCATAAAACATGTTCAAACCCCTCTGCTTTGTGTCCAGGCAGCCAATGATCCGATTGCTCCTAATAGGGGAATTCCCCGTGAAGATATCAAGGAAAATCCAAACTGCTTGTTAATAGTGACATCCAAAGGTGGCCATCTGGGGTGGGTTGCTGGTGATCAAGCTCCACTTGGAGCCCCTTGGACTGATCCTTTGCTCACAAAAAGAAGATCATTCTGGAATATTCTATGGTGCATCCTTAGTCCCAGATTGCTAAAGTGGGAAAGCAACGACGGCATTCTTGTTCATCCAGCAGAACATGGATCTTCTGCAGCTAAGAATATTATCATTTACATACCAGTCAATGGATGCCTGTAG 1323 0.4732 MARSLVGSTSCLSSPYNNVLIKSLHLPPSLSTVHVSSSAVAMSTHHQPHPSFEILGGARDRFLPSLPYLSRPYNPFPLIAWNRHVETIFAAFFRSNPDVRLRRECLRTQDGGAVALDWVSGDDRRLAPDSPLLILLPGLTGGSEDSYVRHMLVRAQSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMREVVSHVSSRYPDANLYAVGWSLGANILVRYLGQESHSCPLSGAVSLCNPFNLVVADEDFRKGFNNIYDKALSKALCKIFKKHALLFEDIGGEYNIPLAANAKTVREFDDGLTRVSFGFKSVDEYYSTSSSLDSIKHVQTPLLCVQAANDPIAPNRGIPREDIKENPNCLLIVTSKGGHLGWVAGDQAPLGAPWTDPLLTKRRSFWNILWCILSPRLLKWESNDGILVHPAEHGSSAAKNIIIYIPVNGCL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00186 440 SUPERFAMILY alpha/beta-Hydrolases 95 378 IPR029058 -
Rops3g00186 440 Pfam alpha/beta hydrolase fold 131 369 IPR000073 -
Rops3g00186 440 ProSitePatterns Uncharacterized protein family UPF0017 signature. 298 339 IPR000952 -
Rops3g00186 440 Gene3D alpha/beta hydrolase 99 377 IPR029058 -
Rops3g00186 440 FunFam Esterase/lipase/thioesterase family protein 107 379 - -
Rops3g00186 440 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 37 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00186 Rops-Chr3 2468704 2472075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00186 102 369 Miscellaneous Gene Families AT2G03140 34.074 1.98e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00186 - - mtr:25479443 653.669