Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00181 ATGGGTTCAGCACCAGAATTGTTGCCTGAAAGAAGTTGCAGCGATAAGCCCCTTGGGATTAGGCTCCTACAGCACTTAAAAGGAAGTCCTGTTTCCTTCAAAACCCACCAAGCCATCGTTCTGAGTGTAACATTTTTGTCTTATGCTGGTTATCATGCTACCAGAAAAACCACAAGTATTGTAAAGACTGTCCTTGATCCCCAATCACCAGATGTAGGCTTGAATTTCCTTCCATTAAGGTTAACCAATTTCAATGAGTCAACTGGATCAAGGAGACTTTCTTCGAAGCTTGGAGATGGTTGGGCTCCATTTAACGGATCAGATGGGACATCCCTTCTTGGTGAATTGGATGTTGCTTTTCTTTCAGTATATGCTTTTGGGATGTACTTTTCTGGACATTTGGGTGACCGGTGTAATTTGAGGATTTTTCTAACAGTGGGGATGCTAGGAACTGCCTTGTTCACTTCACTCTTTGGTGTAGGGTATTGGGCAAACATCCACAACTTCTACTATTATTTAGTAGTTCAAATGATTGCTGGATTGTTTCAATCCACTGGATGGCCATCAGTAGTTGCTGTTGTGGGTAACTGGTTTGGAAAGAGCAAGAGAGGGCTGATCATGGGAATTTGGAATGCTCACACTTCTGTTGGGAACATTGCTGGTTCTTTGATTGCTTCTGCTATGTTGGGCTATGGATGGGGTTGGTCCTTTGTTCTGCCAGGACTAATAACTGCTTTCATTGGTTTGGTGGTTTTCCTTATATTGCCGATCACACCCGAGTCTGTTGGAGCTGAGAGAGAGGAAGATGAATATAGTTGTCCCAAGAAAAGTGGAGAAGAAGTGACAGAGCCTCTGTTAAGGGAAGAGACTCCAGTCAAGGAGAAAGCAGTTGGGTTCATAGAGGCTTGGAAAATTCCTGGCGTAGCTCCTTTTGCTCTTTGTCTGTTTTTTGCCAAATTGGTTGCATATACCTTTCTCTATTGGCTCCCATTCTACGTTAGCCACACAGCAATTGAAGGAAAATATCTATCTAGTGAGACATCAGGAACTCTATCCACTTTATTTGATGTTGGAGGGGTGCTGGGAGGAGTTCTAGCTGGCCACATTTCTGATCGCTTAGATGCTAGAGCCATAACAGCAGCAAGTTTCATGTACTTCGCAATCCCTGCTCTCTACTTCTATCGAAGCTATGGGCACGTTTCGTTGATTGTCAATGGAATATTGATGTTCATCACCGGCATGTTCGTGAATGGGCCTTATGCTCTTATAACAACTGCAGTTTCGGCTGACCTGGGAACACATAAGTCATTGAGGGGAAATTCACGAGCTCTGGCAACTGTCACGGCAATCATTGATGGAACAGGTTCGATAGGGGCTGCAATTGGACCTTTATTAACAGGTTACATATCTGCAAAGAGCTGGAGTGCAGTTTTCTCAATGTTGATGGTAGCAGCTTTAATTGCAGGGCTGCTTCTGACCAGGCTTGTAGTGTCAGAGGTGGTCACAAAGATTGAAGAGTCAAGGTCTCATAGAGCACAAGAAGGTCCACTCGAAGTATAA 1560 0.4397 MGSAPELLPERSCSDKPLGIRLLQHLKGSPVSFKTHQAIVLSVTFLSYAGYHATRKTTSIVKTVLDPQSPDVGLNFLPLRLTNFNESTGSRRLSSKLGDGWAPFNGSDGTSLLGELDVAFLSVYAFGMYFSGHLGDRCNLRIFLTVGMLGTALFTSLFGVGYWANIHNFYYYLVVQMIAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSVGNIAGSLIASAMLGYGWGWSFVLPGLITAFIGLVVFLILPITPESVGAEREEDEYSCPKKSGEEVTEPLLREETPVKEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAIEGKYLSSETSGTLSTLFDVGGVLGGVLAGHISDRLDARAITAASFMYFAIPALYFYRSYGHVSLIVNGILMFITGMFVNGPYALITTAVSADLGTHKSLRGNSRALATVTAIIDGTGSIGAAIGPLLTGYISAKSWSAVFSMLMVAALIAGLLLTRLVVSEVVTKIEESRSHRAQEGPLEV* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00181 519 PIRSF Hexose_phosphate_transp 23 513 IPR000849 GO:0016020|GO:0022857|GO:0055085
Rops3g00181 519 SUPERFAMILY MFS general substrate transporter 111 496 IPR036259 -
Rops3g00181 519 Gene3D MFS general substrate transporter like domains 302 510 IPR036259 -
Rops3g00181 519 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 501 IPR020846 GO:0022857
Rops3g00181 519 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 14 512 - -
Rops3g00181 519 Pfam Major Facilitator Superfamily 113 431 IPR011701 GO:0022857|GO:0055085
Rops3g00181 519 FunFam Sugar phosphate exchanger 3 isoform 1 31 270 - -
Rops3g00181 519 FunFam glucose-6-phosphate exchanger SLC37A2 isoform X1 298 502 - -
Rops3g00181 519 Gene3D MFS general substrate transporter like domains 31 270 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00181 Rops-Chr3 2431682 2435055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00181 1 518 Organic Solute Cotransporters AT3G47420 72.275 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00181 K13783 - gmx:100799211 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00181 3 2431682 2435055 Rops3g00181 3 2431682 2435055 ECH