Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00180 ATGGCGTCCTCTCTTGCCGTGAAACGCTTCCTCTCCTCTGGCCTCCTCTCCAAGTCTCTCCTTCGCCCCGCGGCCTCTGCTTCACGCTCCTTCAACACCAATGCCATGCGCCAGTACGATGATCATTCCGATGACCGCAACATTGATGTGGATCGTCGCTCTAATCGCACTGCACGCCGCGATGATTTCCTCTCAGATGTGTTTGATCCATTTTCTCCAACTAGGAGCTTGAGCCAAGTTCTGAACATGATGGATCAATTCATGGAGAATCCATTCCTCTCTGCTTCGCGTGGAATCGGAGCTGGAGTTCGTCGTGGATGGGACGCGCGAGAGACGGATGATGCTCTGCTTCTCCGCTTGGACATGCCTGGGCTTGGCAAGCAAGATGTGAAGATCTCCATGGAGCAGAACACACTCACCATCAAAGGTGAAGGTGCTAATGAAGGTGATGACGAGGAAGGTACTCGTCGCTACACTAGCAGGATTGACTTGCCAAACAAGCTTTACAAGATTGATCAGATCAAAGCTGAGATGAAGAACGGTGTGCTCAAGGTCATTGTGCCTAAAATGAAGGAGGAGGAAAGGAGTGATGTGATCAATATCAAGGTCGAGTAG 615 0.5089 MASSLAVKRFLSSGLLSKSLLRPAASASRSFNTNAMRQYDDHSDDRNIDVDRRSNRTARRDDFLSDVFDPFSPTRSLSQVLNMMDQFMENPFLSASRGIGAGVRRGWDARETDDALLLRLDMPGLGKQDVKISMEQNTLTIKGEGANEGDDEEGTRRYTSRIDLPNKLYKIDQIKAEMKNGVLKVIVPKMKEEERSDVINIKVE* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00180 204 Pfam Hsp20/alpha crystallin family 109 203 IPR002068 -
Rops3g00180 204 Gene3D - 62 203 IPR008978 -
Rops3g00180 204 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 26 199 IPR044656 -
Rops3g00180 204 SUPERFAMILY HSP20-like chaperones 73 195 IPR008978 -
Rops3g00180 204 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 94 204 IPR002068 -
Rops3g00180 204 MobiDBLite consensus disorder prediction 38 53 - -
Rops3g00180 204 MobiDBLite consensus disorder prediction 32 53 - -
Rops3g00180 204 CDD ACD_sHsps-like 108 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00180 Rops-Chr3 2423116 2424125 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00180 K13993 - gmx:547852 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00180 3 2423116 2424125 Rops3g00180 3 2423116 2424125 ECH